RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 LRRC28Q86X40 367 aaPredicted RBP11.39□□□□□ -0.59
SGCA-201ENST00000262018 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 OR8B12Q8NGG6 310 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 OR13C3Q8NGS6 347 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 SDHCQ99643 169 aaPredicted RBP11.39□□□□□ -0.59
SGCA-201ENST00000262018 USB1Q9BQ65 265 aaKnown RBP11.39□□□□□ -0.59
SGCA-201ENST00000262018 HDHD2Q9H0R4 259 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 METTL17Q9H7H0 456 aaPredicted RBP11.39□□□□□ -0.59
SGCA-201ENST00000262018 BRD7Q9NPI1 651 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 NPAP1Q9NZP6 1156 aa11.39□□□□□ -0.59
SGCA-201ENST00000262018 A0A1B0GTI1 187 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 FABP12A6NFH5 140 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 IFITM5A6NNB3 132 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 H3BSH0 61 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 AIPO00170 330 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 NDUFS8O00217 210 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 TBX1O43435 398 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SGCEO43556 437 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SYNGR3O43761 229 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 DOK2O60496 412 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 FARS2O95363 451 aaKnown RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 ZNF32P17041 273 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 CCL1P22362 96 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 IGHV1-2P23083 117 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 MPGP29372 298 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SCAND1P57086 179 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 ARF1P84077 181 aaKnown RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 ZNF79Q15937 498 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 ASPHD2Q6ICH7 369 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 CNIH2Q6PI25 160 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SLC16A14Q7RTX9 510 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SKA3Q8IX90 412 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 ZNF433Q8N7K0 673 aaPredicted RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 POC5Q8NA72 575 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 TRMT10AQ8TBZ6 339 aaKnown RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 CHAC2Q8WUX2 184 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SPTSSAQ969W0 71 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 MUCL1Q96DR8 90 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 RADILQ96JH8 1075 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SRRQ9GZT4 340 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 SLC17A5Q9NRA2 495 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 ABCB10Q9NRK6 738 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
SGCA-201ENST00000262018 PLEK2Q9NYT0 353 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 TIMM10BQ9Y5J6 103 aa11.38□□□□□ -0.59
SGCA-201ENST00000262018 A0A1B0GVI7 797 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 OR6C6A6NF89 314 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 PAHP00439 452 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 IGLV3-1P01715 115 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 HLA-DQB1P01920 261 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 HNRNPCP07910 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
SGCA-201ENST00000262018 MMP7P09237 267 aaPredicted RBP11.37□□□□□ -0.59
SGCA-201ENST00000262018 CD37P11049 281 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 GALK2Q01415 458 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 TGFBR3Q03167 851 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 SPOCK1Q08629 439 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 FAM131AQ6UXB0 335 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 OR1F12Q8NHA8 337 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 FGFBP3Q8TAT2 258 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 C15orf40Q8WUR7 153 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 OR2H1Q9GZK4 316 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 WNT5BQ9H1J7 359 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 CYSLTR2Q9NS75 346 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 ZNF319Q9P2F9 582 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
SGCA-201ENST00000262018 TRRAPQ9Y4A5 3859 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 A0A0U1RQV5 110 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 ANXA2P2A6NMY6 339 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 M0R135 149 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 SYT7O43581 403 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 LYZL6O75951 148 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 MAS1P04201 325 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 ANXA2P07355 339 aaKnown RBP11.36□□□□□ -0.59
SGCA-201ENST00000262018 ITGA5P08648 1049 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 SLC2A1P11166 492 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 SNRPBP14678 240 aaKnown RBP11.36□□□□□ -0.59
SGCA-201ENST00000262018 ELK1P19419 428 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 PSG4Q00888 419 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 ASAH1Q13510 395 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 AWAT1Q58HT5 328 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 HES5Q5TA89 166 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 Q6ZSR3 168 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 PEG10Q86TG7 708 aaKnown RBP11.36□□□□□ -0.59
SGCA-201ENST00000262018 SNX29P2Q8IUI4 249 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 SAMD12Q8N8I0 201 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 C1orf162Q8NEQ5 155 aaPredicted RBP11.36□□□□□ -0.59
SGCA-201ENST00000262018 OR5H6Q8NGV6 325 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 OR51E1Q8TCB6 317 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
SGCA-201ENST00000262018 ZNF799Q96GE5 643 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 PPP1R3EQ9H7J1 279 aa11.36□□□□□ -0.59
SGCA-201ENST00000262018 TAS2R4Q9NYW5 299 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms