RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 hCG_1809904A0A1W2PP81 198 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 A0A1W2PR64 198 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 A0A1W2PRV1 198 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 CST4P01036 141 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 FOSL2P15408 326 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 NQO2P16083 231 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 FPR2P25090 351 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 ADH6P28332 368 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 DAP3P51398 398 aaKnown RBP16.68■□□□□ 0.26
SNX4-201ENST00000251775 SPEM2Q0P670 501 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 HMGN3Q15651 99 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 PCK2Q16822 640 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 ANGPTL5Q86XS5 388 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 SHDQ96IW2 340 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 OCSTAMPQ9BR26 566 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 PMS2P1A4D2B8 440 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 TOX3O15405 576 aaPredicted RBP16.68■□□□□ 0.26
SNX4-201ENST00000251775 DAOP14920 347 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 RAB5AP20339 215 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 SUMO3P55854 103 aaPredicted RBP16.68■□□□□ 0.26
SNX4-201ENST00000251775 CLDN6P56747 220 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 ACY1Q03154 408 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 DNM1P34Q6PK57 102 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 EMC6Q9BV81 110 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 FBLN5Q9UBX5 448 aa16.68■□□□□ 0.26
SNX4-201ENST00000251775 A0A1W2PQM1 296 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 SCRG1O75711 98 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 RPS2P15880 293 aaKnown RBP16.67■□□□□ 0.26
SNX4-201ENST00000251775 GLP1RP43220 463 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 P2RY4P51582 365 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 FOXRED2Q8IWF2 684 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 OR13C9Q8NGT0 318 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 SLC22A8Q8TCC7 542 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 DDIT4LQ96D03 193 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 C5orf34Q96MH7 638 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 CENPMQ9NSP4 180 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 STARD10Q9Y365 291 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 LIPT2A6NK58 231 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 SOCS1O15524 211 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 RAD51DO75771 328 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 HTR3BO95264 441 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 TTRP02766 147 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 HOXB5P09067 269 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 ZNF101Q8IZC7 436 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 TMEM104Q8NE00 496 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 OR13G1Q8NGZ3 307 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 RNF138Q8WVD3 245 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 KLRF1Q9NZS2 232 aa16.67■□□□□ 0.26
SNX4-201ENST00000251775 VSTM2BA6NLU5 285 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 GATCO43716 136 aaKnown RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 FBP1P09467 338 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 PRF1P14222 555 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 ZNF708P17019 499 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 EIF2S3P41091 472 aaKnown RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 CXCL12P48061 93 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 ACTBL2Q562R1 376 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 AADACL3Q5VUY0 350 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 LHFPL1Q86WI0 220 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 KDF1Q8NAX2 398 aaPredicted RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 TCTEX1D2Q8WW35 142 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 C20orf24Q9BUV8 137 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 SCRT1Q9BWW7 348 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 PARP12Q9H0J9 701 aaKnown RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 FAM206AQ9NX38 181 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 LY6G6EA0A0G2JKS1 128 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 NPIPB13A6NJU9 1138 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 NPIPB4C9JG80 1138 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 NDUFS6O75380 124 aaKnown RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 CHRM2P08172 466 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 GSTP1P09211 210 aaKnown RBP16.66■□□□□ 0.26
SNX4-201ENST00000251775 H2BFMP0C1H6 154 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 GLRA1P23415 457 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 LAP3P28838 519 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 PTGDSP41222 190 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 MMP16P51512 607 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 CCL7P80098 99 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 LCN10Q6JVE6 187 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 Q7L0L9 218 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 RAB3CQ96E17 227 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 SPACA5Q96QH8 159 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 FBXL17Q9UF56 701 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 U3KQA8 63 aa16.66■□□□□ 0.26
SNX4-201ENST00000251775 PPIHO43447 177 aaKnown RBP16.65■□□□□ 0.26
SNX4-201ENST00000251775 SFTPBP07988 381 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 HIST1H1DP16402 221 aaKnown RBP16.65■□□□□ 0.26
SNX4-201ENST00000251775 ZNF93P35789 620 aaPredicted RBP16.65■□□□□ 0.26
SNX4-201ENST00000251775 BIDP55957 195 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 FAM69BQ5VUD6 431 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 ZNF529Q6P280 563 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.65■□□□□ 0.26
SNX4-201ENST00000251775 POC1BQ8TC44 478 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 CLDN23Q96B33 292 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 RGCCQ9H4X1 137 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 SERINC1Q9NRX5 453 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 PPP4R1LQ9P1A2 415 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 B3GAT1Q9P2W7 334 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 AP4M1O00189 453 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 SYT7O43581 403 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 OPN1LWP04000 364 aa16.65■□□□□ 0.26
SNX4-201ENST00000251775 RPL12P30050 165 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms