RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IL5RAQ01344 420 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 PRB3Q04118 309 aaPredicted RBP8.43□□□□□ -1.06
VPS50-201ENST00000251739 PRDX4Q13162 271 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 KLRD1Q13241 179 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 SNCBQ16143 134 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 DGUOKQ16854 277 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 DHRS7BQ6IAN0 325 aaPredicted RBP8.43□□□□□ -1.06
VPS50-201ENST00000251739 OR2T5Q6IEZ7 315 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 HCP5Q6MZN7 132 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 C16orf89Q6UX73 402 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 ERI1Q8IV48 349 aaKnown RBP8.43□□□□□ -1.06
VPS50-201ENST00000251739 CMTM4Q8IZR5 234 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 OR6N2Q8NGY6 317 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 OR2T29Q8NH02 315 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 OTOSQ8NHW6 89 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 OR5P3Q8WZ94 311 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 AJUBAQ96IF1 538 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 LYZL4Q96KX0 146 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 PKP2Q99959 881 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 NIPSNAP1Q9BPW8 284 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 RTL8AQ9BWD3 113 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 OR10A2Q9H208 303 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 MUC13Q9H3R2 512 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 DNAJC27Q9NZQ0 273 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 ZNF222Q9UK12 451 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 CAB39Q9Y376 341 aaPredicted RBP8.43□□□□□ -1.06
VPS50-201ENST00000251739 FAM96BQ9Y3D0 163 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 SAMHD1Q9Y3Z3 626 aaKnown RBP8.43□□□□□ -1.06
VPS50-201ENST00000251739 ARRDC5A6NEK1 342 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 ANXA2P2A6NMY6 339 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 M0R1W7 72 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 TFF1P04155 84 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 TGFBR2P37173 567 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 GNALP38405 381 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 UBE2E1P51965 193 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 IKZF1Q13422 519 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 GK3PQ14409 553 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 LRRC10Q5BKY1 277 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 CRIP3Q6Q6R5 217 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 SHFQ7M4L6 423 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 PIGWQ7Z7B1 504 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 ARHGAP24Q8N264 748 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 FTMTQ8N4E7 242 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 IQCF1Q8N6M8 205 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 BEND2Q8NDZ0 799 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 OR5T2Q8NGG2 359 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 OR5R1Q8NH85 324 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 RPL3LQ92901 407 aaKnown RBP8.42□□□□□ -1.06
VPS50-201ENST00000251739 UBE2FQ969M7 185 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 MYCBPQ99417 103 aaPredicted RBP8.42□□□□□ -1.06
VPS50-201ENST00000251739 MICU1Q9BPX6 476 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 METTL8Q9H825 291 aaKnown RBP8.42□□□□□ -1.06
VPS50-201ENST00000251739 REEP1Q9H902 201 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 TCF7L1Q9HCS4 588 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 ABCB9Q9NP78 766 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 ZNF391Q9UJN7 358 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 KLHDC2Q9Y2U9 406 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 U3KQV3 271 aa8.42□□□□□ -1.06
VPS50-201ENST00000251739 IGKV1D-17A0A075B6S4 117 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 ZNF816-ZNF321PA0A0X1KG74 233 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 NKX6-3A6NJ46 265 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 ZNF850A8MQ14 1090 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 PRODHO43272 600 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 AKR7A2O43488 359 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 SELENOFO60613 162 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 LYNP07948 512 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 ACAA1P09110 424 aaPredicted RBP8.41□□□□□ -1.06
VPS50-201ENST00000251739 EEF1B2P24534 225 aaKnown RBP8.41□□□□□ -1.06
VPS50-201ENST00000251739 MS4A2Q01362 244 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 ACSM1Q08AH1 577 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 C2orf68Q2NKX9 166 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 GFOD2Q3B7J2 385 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 NCR3LG1Q68D85 454 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 PNKDQ8N490 385 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 OR10G2Q8NGC3 310 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 OR8B12Q8NGG6 310 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 TEX47Q8TBZ9 253 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 MED30Q96HR3 178 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 FEVQ99581 238 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 SNTG1Q9NSN8 517 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 SLC25A10Q9UBX3 287 aaPredicted RBP8.41□□□□□ -1.06
VPS50-201ENST00000251739 FBLN5Q9UBX5 448 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 ARL2BPQ9Y2Y0 163 aa8.41□□□□□ -1.06
VPS50-201ENST00000251739 TRBV23-1A0A0A0MS06 115 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 MEIOCA2RUB1 952 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 BTBD17A6NE02 478 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 OR2AT4A6NND4 320 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 RHBDL1O75783 438 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 DCTN3O75935 186 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 IGLV3-1P01715 115 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 H2BFMP0C1H6 154 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 ALOX5APP20292 161 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 SLC2A5P22732 501 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 VAMP1P23763 118 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 EFNB2P52799 333 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 ID3Q02535 119 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 EGR3Q06889 387 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 TRIM25Q14258 630 aaKnown RBP8.4□□□□□ -1.06
VPS50-201ENST00000251739 AANATQ16613 207 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms