RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GFERP55789 205 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ZNF793Q6ZN11 406 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 BVESQ8NE79 360 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 FBP1P09467 338 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PNLIPP16233 465 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CD200P41217 278 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 Q5BKY6 102 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 FLRT3Q9NZU0 649 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 OR5G3P0C626 314 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ELFN2Q5R3F8 820 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MUC15Q8N387 334 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MED18Q9BUE0 208 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 TMPRSS5Q9H3S3 457 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ST3GAL6Q9Y274 331 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 F8P00451 2351 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 AWAT1Q58HT5 328 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MCTS1Q9ULC4 181 aaKnown RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 ARL6IP1Q15041 203 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 SLC35D3Q5M8T2 416 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 BTNL8Q6UX41 500 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ADGRG3Q86Y34 549 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 APCDD1LQ8NCL9 501 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 SMIM4Q8WVI0 70 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MS4A10Q96PG2 267 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 SLC25A19Q9HC21 320 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 HNRNPA1P09651 372 aaKnown RBP eCLIP6.75□□□□□ -1.33
RIF1-201ENST00000243326 CT62P0C5K7 136 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ZNF266Q14584 549 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ZNF79Q15937 498 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 FAM109BQ6ICB4 259 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 PELI1Q96FA3 418 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 HEATR5AQ86XA9 2040 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CXCL13O43927 109 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 DEFA4P12838 97 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CXCL2P19875 107 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 DYNLT3P51808 116 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PRDX4Q13162 271 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 VWA1Q6PCB0 445 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 HDHD3Q9BSH5 251 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 OR51B4Q9Y5P0 310 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 FBLL1A6NHQ2 334 aaKnown RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 POU2F2P09086 479 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PAX6P26367 422 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 SNCAP37840 140 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 RFESDQ8TAC1 157 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ISG20Q96AZ6 181 aaKnown RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 DOK1Q99704 481 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 DYNLRB1Q9NP97 96 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 IGHV3-21A0A0B4J1V1 117 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 DPPA3Q6W0C5 159 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MS4A3Q96HJ5 214 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ZFHX2Q9C0A1 2572 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 ZFAND5O76080 213 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ERVFC1-1P60608 527 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 LIMS2Q7Z4I7 341 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 TMEM229BQ8NBD8 167 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 ELF5Q9UKW6 265 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 DAPP1Q9UN19 280 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 HS3ST2Q9Y278 367 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MRPS2Q9Y399 296 aaKnown RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 LIPGQ9Y5X9 500 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 HCFC2Q9Y5Z7 792 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 PLSCR5A0PG75 271 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 LMX1BO60663 402 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CEBPDP49716 269 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 SIGLEC6O43699 453 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CNIH1O95406 144 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 CELA2BP08218 269 aaPredicted RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 CD38P28907 300 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 MMP15P51511 669 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 BCO1Q9HAY6 547 aa6.75□□□□□ -1.33
RIF1-201ENST00000243326 TECRQ9NZ01 308 aaKnown RBP6.75□□□□□ -1.33
RIF1-201ENST00000243326 COL4A1P02462 1669 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SNRPGP15A8MWD9 76 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 KLK2P20151 261 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 TPBGQ13641 420 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 RSPO4Q2I0M5 234 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 OR52N5Q8NH56 324 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 MOGAT1Q96PD6 335 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ASIC5Q9NY37 505 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 SLC35B1P78383 322 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 C3AR1Q16581 482 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 C11orf40Q8WZ69 217 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SUSD2Q9UGT4 822 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ERRFI1Q9UJM3 462 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 NRASP01111 189 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 FOXF1Q12946 379 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CATR1Q13166 79 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 C17orf99Q6UX52 265 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 LANCL3Q6ZV70 420 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CTDSP1Q9GZU7 261 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PRAMEF26H0Y7S4 382 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 M0R135 149 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 C1QAP02745 245 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms