RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ACTL6AO96019 429 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 ACKR3P25106 362 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 RFC3P40938 356 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 SLC35A1P78382 337 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 AIMP2Q13155 320 aaKnown RBP14.75□□□□□ -0.05
SSPN-201ENST00000242729 TSPO2Q5TGU0 170 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 C5orf24Q7Z6I8 188 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 PIK3IP1Q96FE7 263 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 CDC6Q99741 560 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 ULBP2Q9BZM5 246 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 FAM117AQ9C073 453 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 PRDM6Q9NQX0 595 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 C19orf25Q9UFG5 118 aaPredicted RBP14.75□□□□□ -0.05
SSPN-201ENST00000242729 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 M0R135 149 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 TP53I11O14683 189 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 TLX3O43711 291 aaPredicted RBP14.75□□□□□ -0.05
SSPN-201ENST00000242729 B4GALT1P15291 398 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 SLC25A53Q5H9E4 307 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 C9orf135Q5VTT2 229 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 ZNF774Q6NX45 483 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 TMEM17Q86X19 198 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 ZNF799Q96GE5 643 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 PECRQ9BY49 303 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 PCED1AQ9H1Q7 454 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 PLEKHJ1Q9NW61 149 aa14.75□□□□□ -0.05
SSPN-201ENST00000242729 ABCD4O14678 606 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 ICAM2P13598 275 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 MTCP1P56278 107 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 HGFACQ04756 655 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 ZNF345Q14585 488 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 MRPL14Q6P1L8 145 aaKnown RBP14.74□□□□□ -0.05
SSPN-201ENST00000242729 DBX1A6NMT0 343 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 DNASE2O00115 360 aaPredicted RBP14.74□□□□□ -0.05
SSPN-201ENST00000242729 ZIC3O60481 467 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 FBXO24O75426 580 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 CD63P08962 238 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 FXYD4P59646 89 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 HIST3H3Q16695 136 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 CBLN2Q8IUK8 224 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 OR9K2Q8NGE7 335 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 ZNF2Q9BSG1 426 aaPredicted RBP14.74□□□□□ -0.05
SSPN-201ENST00000242729 NELFAQ9H3P2 528 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 LDAHQ9H6V9 325 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 PROK2Q9HC23 129 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 ZNF107Q9UII5 783 aaPredicted RBP14.74□□□□□ -0.05
SSPN-201ENST00000242729 HS3ST3B1Q9Y662 390 aa14.74□□□□□ -0.05
SSPN-201ENST00000242729 PMS2P1A4D2B8 440 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 TOR1AO14656 332 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 TRAPPC6AO75865 159 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 TSPAN9O75954 239 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 SFT2D2O95562 160 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 SERPINA5P05154 406 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 GSTP1P09211 210 aaKnown RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 OR2A2Q6IF42 318 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 FADS6Q8N9I5 356 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 GJC3Q8NFK1 279 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 TSNAXQ99598 290 aaKnown RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 PIGQQ9BRB3 760 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 MOB1AQ9H8S9 216 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 CRLF2Q9HC73 371 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 FREM1Q5H8C1 2179 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 MED19A0JLT2 244 aaPredicted RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 ZNF705EA8MWA4 302 aaPredicted RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 ETV2O00321 342 aaPredicted RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 ADCYAP1P18509 176 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 NOVA1P51513 510 aaKnown RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 SHDQ96IW2 340 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 TREM1Q9NP99 234 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 HDGFL3Q9Y3E1 203 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 DHHO43323 396 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 DKK1O94907 266 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 GRB2P62993 217 aaKnown RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 Q7L0L9 218 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 SEMA6DQ8NFY4 1073 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 RNF138Q8WVD3 245 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 MARC2Q969Z3 335 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 NABP1Q96AH0 204 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 SGK3Q96BR1 496 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 NKX6-2Q9C056 277 aaPredicted RBP14.73□□□□□ -0.05
SSPN-201ENST00000242729 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 FANCFQ9NPI8 374 aa14.73□□□□□ -0.05
SSPN-201ENST00000242729 IGHV1-45A0A0A0MS14 117 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 MSTNO14793 375 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 DHRS3O75911 302 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 LCATP04180 440 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 RFPL3SP0C7P2 107 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 OTX2P32243 289 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 PTGER4P35408 488 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SSPN-201ENST00000242729 ECH1Q13011 328 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 BAP18Q8IXM2 172 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 HLA-CQ95604 372 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 LIME1Q9H400 295 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 CYTL1Q9NRR1 136 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 LAMA5O15230 3695 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 CCDC187A0A096LP49 1063 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 C3orf80F5H4A9 247 aa14.72□□□□□ -0.05
SSPN-201ENST00000242729 FARS2O95363 451 aaKnown RBP14.72□□□□□ -0.05
SSPN-201ENST00000242729 KLK3P07288 261 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms