RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DLL3Q9NYJ7 618 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 KCNN3Q9UGI6 736 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 KCNK7Q9Y2U2 307 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 TMEM225BP0DP42 221 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 TMEM50BP56557 158 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 RAB1AP62820 205 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 RTL6Q6ICC9 239 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 ASCC1Q8N9N2 400 aaKnown RBP20.19■□□□□ 0.82
MSX2-201ENST00000239243 NANOS1Q8WY41 292 aaKnown RBP20.19■□□□□ 0.82
MSX2-201ENST00000239243 METTL9Q9H1A3 318 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 C12orf49Q9H741 205 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 PRSS50Q9UI38 385 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 RTTNQ86VV8 2226 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 LOC100509620A0A075B734 347 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 TMEM82A0PJX8 343 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 SSX5O60225 188 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 ZNF780AO75290 641 aaPredicted RBP20.19■□□□□ 0.82
MSX2-201ENST00000239243 VSIG10L2P0DP72 767 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 OR3A2P47893 321 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 FUT6P51993 359 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 SF3B4Q15427 424 aaKnown RBP eCLIP20.19■□□□□ 0.82
MSX2-201ENST00000239243 ACTBL2Q562R1 376 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 GVQW1Q8N7I0 195 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 APOBEC3DQ96AK3 386 aaPredicted RBP20.19■□□□□ 0.82
MSX2-201ENST00000239243 ARHGAP5-AS1Q96IT6 56 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 MYOZ1Q9NP98 299 aaPredicted RBP20.19■□□□□ 0.82
MSX2-201ENST00000239243 ANAPC10Q9UM13 185 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 KCNMB2Q9Y691 235 aa20.19■□□□□ 0.82
MSX2-201ENST00000239243 FAM230AA0A1W2PPH8 454 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 MALLQ13021 153 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 DLL4Q9NR61 685 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 PLSCR3Q9NRY6 295 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 MGAT4CQ9UBM8 478 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 BOLA1Q9Y3E2 137 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 C5orf49A4QMS7 147 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 AQP7O14520 342 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 SS18L1O75177 396 aaPredicted RBP20.18■□□□□ 0.82
MSX2-201ENST00000239243 SERPINA5P05154 406 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 ATP1B3P54709 279 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 SCGB2B2Q4G0G5 96 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 OR1K1Q8NGR3 316 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 SLC6A7Q99884 636 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 GON7Q9BXV9 100 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 FREM1Q5H8C1 2179 aa20.18■□□□□ 0.82
MSX2-201ENST00000239243 FOXI3A8MTJ6 420 aaPredicted RBP20.17■□□□□ 0.82
MSX2-201ENST00000239243 SERPINE3A8MV23 424 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 CSTBP04080 98 aaKnown RBP20.17■□□□□ 0.82
MSX2-201ENST00000239243 NAT1P18440 290 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 CCNOP22674 350 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 ARFRP1Q13795 201 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 OR10K1Q8NGX5 313 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 OCSTAMPQ9BR26 566 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 OPA3Q9H6K4 179 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 CLCF1Q9UBD9 225 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 ARHGAP21Q5T5U3 1957 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 OR14I1A6ND48 311 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 IFNA6P05013 189 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 BLVRBP30043 206 aaPredicted RBP20.17■□□□□ 0.82
MSX2-201ENST00000239243 CXADRP78310 365 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 PPA1Q15181 289 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 RSU1Q15404 277 aa20.17■□□□□ 0.82
MSX2-201ENST00000239243 CA11O75493 328 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 HRH1P35367 487 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 C4orf46Q504U0 113 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 OR52W1Q6IF63 320 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 CD163Q86VB7 1156 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 ZNF431Q8TF32 576 aaPredicted RBP20.16■□□□□ 0.82
MSX2-201ENST00000239243 SARAFQ96BY9 339 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 POFUT1Q9H488 388 aa20.16■□□□□ 0.82
MSX2-201ENST00000239243 IL18BPO95998 194 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 NDUFA5Q16718 116 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 NKPD1Q17RQ9 610 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 PLCXD3Q63HM9 321 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 ASCL4Q6XD76 172 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 ZADH2Q8N4Q0 377 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 OR4K15Q8NH41 348 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 POM121L2Q96KW2 1035 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 Q96M66 194 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 REPIN1Q9BWE0 567 aaKnown RBP20.15■□□□□ 0.82
MSX2-201ENST00000239243 PCDHB16Q9NRJ7 776 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 CNOT1A5YKK6 2376 aaKnown RBP20.15■□□□□ 0.82
MSX2-201ENST00000239243 ZNF503-AS2A6NEH8 195 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 CSN2P05814 226 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 GIPP09681 153 aaPredicted RBP20.15■□□□□ 0.82
MSX2-201ENST00000239243 MOB3CQ70IA8 216 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 ZDHHC22Q8N966 263 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 OR13C8Q8NGS7 320 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 PIGCQ92535 297 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 EIF3KQ9UBQ5 218 aaKnown RBP20.15■□□□□ 0.82
MSX2-201ENST00000239243 MGAT4AQ9UM21 535 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 HSPB11Q9Y547 144 aa20.15■□□□□ 0.82
MSX2-201ENST00000239243 DNASE1P24855 282 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 APLNRP35414 380 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 NLRC3Q7RTR2 1065 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 MRPL21Q7Z2W9 205 aaKnown RBP20.14■□□□□ 0.81
MSX2-201ENST00000239243 FTMTQ8N4E7 242 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 PXT1Q8NFP0 134 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 OR52B4Q8NGK2 314 aa20.14■□□□□ 0.81
MSX2-201ENST00000239243 BCL2L2Q92843 193 aaPredicted RBP20.14■□□□□ 0.81
MSX2-201ENST00000239243 PECRQ9BY49 303 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms