RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 COMPP49747 757 aaPredicted RBP11.77□□□□□ -0.52
GPN3-201ENST00000228827 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 DEFB112Q30KQ8 113 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 MOB3CQ70IA8 216 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 GID4Q8IVV7 300 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 CENPNQ96H22 339 aaPredicted RBP11.77□□□□□ -0.52
GPN3-201ENST00000228827 WDFY2Q96P53 400 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 TBX15Q96SF7 602 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 TNFRSF19Q9NS68 423 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 CLN6Q9NWW5 311 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 NUFIP1Q9UHK0 495 aaKnown RBP11.77□□□□□ -0.52
GPN3-201ENST00000228827 ENOPH1Q9UHY7 261 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 PIGLQ9Y2B2 252 aa11.77□□□□□ -0.52
GPN3-201ENST00000228827 LOC110117498-PIK3R3F6TDL0 507 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 P2RY10O00398 339 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 RHBDL1O75783 438 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 TTRP02766 147 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 LIPFP07098 398 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SELLP14151 372 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 MMP9P14780 707 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 AWAT1Q58HT5 328 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 FAM76BQ5HYJ3 339 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 BCL2L15Q5TBC7 163 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 PLCXD3Q63HM9 321 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 OR10Z1Q8NGY1 313 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 TAF15Q92804 592 aaKnown RBP eCLIP11.76□□□□□ -0.53
GPN3-201ENST00000228827 LHX4Q969G2 390 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 RAB3IPQ96QF0 476 aaPredicted RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 HAO2Q9NYQ3 351 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 CENPVL3A0A0U1RRI6 287 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 NKX6-3A6NJ46 265 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 NDUFB3O43676 98 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SRSF10O75494 262 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 RPP14O95059 124 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 ECDO95905 644 aaPredicted RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 AMY2BP19961 511 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 ACTR3P61158 418 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 GNG3P63215 75 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 CEACAM21Q3KPI0 293 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 STUMQ69YW2 141 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 PDZD9Q8IXQ8 264 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 C12orf43Q96C57 262 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 MNTQ99583 582 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 GABARAPL3Q9BY60 117 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 SIRPDQ9H106 197 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 CNTD2Q9H8S5 307 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 ZMAT3Q9HA38 289 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 ENPP5Q9UJA9 477 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 RPUSD1Q9UJJ7 312 aaKnown RBP11.76□□□□□ -0.53
GPN3-201ENST00000228827 OR52A1Q9UKL2 312 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 R4GMQ9 66 aa11.76□□□□□ -0.53
GPN3-201ENST00000228827 A6NIN4 97 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 H3BSH0 61 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 HOXA3O43365 443 aaPredicted RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 DHRS3O75911 302 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 RNASE1P07998 156 aaKnown RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 HKR1P10072 659 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 GLRA1P23415 457 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 KPNB1Q14974 876 aaKnown RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 LRRC10Q5BKY1 277 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 CCDC121Q6ZUS5 278 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 YIPF7Q8N8F6 280 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 OR5A2Q8NGI9 324 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 RBM4BQ9BQ04 359 aaKnown RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 OSBPL10Q9BXB5 764 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 MOB1AQ9H8S9 216 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 GPR173Q9NS66 373 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 NLKQ9UBE8 527 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 WARS2Q9UGM6 360 aaKnown RBP11.75□□□□□ -0.53
GPN3-201ENST00000228827 SLC22A13Q9Y226 551 aa11.75□□□□□ -0.53
GPN3-201ENST00000228827 A0A1W2PQL4 384 aaPredicted RBP11.74□□□□□ -0.53
GPN3-201ENST00000228827 NRASP01111 189 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 HTR1FP30939 366 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 ATP6V1E1P36543 226 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 GABRA2P47869 451 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 TGM4P49221 684 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 EGR3Q06889 387 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 PDCD1Q15116 288 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
GPN3-201ENST00000228827 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
GPN3-201ENST00000228827 ELMOD2Q8IZ81 293 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms