RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
PAF1-201ENST00000221265 DPCDQ9BVM2 203 aaPredicted RBP13.17□□□□□ -0.3
PAF1-201ENST00000221265 ASF1BQ9NVP2 202 aa13.17□□□□□ -0.3
PAF1-201ENST00000221265 COL6A6A6NMZ7 2263 aa13.17□□□□□ -0.3
PAF1-201ENST00000221265 SULT1C2O00338 296 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 SYT7O43581 403 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 TNFSF13O75888 250 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 OR2A4O95047 310 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 GIPP09681 153 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 PCBD1P61457 104 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 COMMD2Q86X83 199 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 PGAM5Q96HS1 289 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 LYZL4Q96KX0 146 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 OR2A7Q96R45 310 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 SLX1AQ9BQ83 275 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 MOB1AQ9H8S9 216 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 RLN1P04808 185 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 LPLP06858 475 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 CD79AP11912 226 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 TSPAN5P62079 268 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 NKAIN3Q8N8D7 197 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 FAM57AQ8TBR7 257 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 SPTSSAQ969W0 71 aa13.16□□□□□ -0.3
PAF1-201ENST00000221265 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 FAM71F1Q96KD3 344 aaPredicted RBP13.16□□□□□ -0.3
PAF1-201ENST00000221265 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
PAF1-201ENST00000221265 LYZL6O75951 148 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 CCL2P13500 99 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 OR3A3P47888 321 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 PRSS12P56730 875 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 ACTBP60709 375 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 ACTG1P63261 375 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 DHODHQ02127 395 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 PMPCAQ10713 525 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 KRTAP27-1Q3LI81 207 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.3
PAF1-201ENST00000221265 CHST6Q9GZX3 395 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 SCPEP1Q9HB40 452 aa13.15□□□□□ -0.3
PAF1-201ENST00000221265 POLEQ07864 2286 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 LOC100509620A0A075B734 347 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 A0A1W2PR80 420 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 BDKRB2P30411 391 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 TAS2R19P59542 299 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 RAP2BP61225 183 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 IKZF1Q13422 519 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 C1orf185Q5T7R7 199 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 UXS1Q8NBZ7 420 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 OR6K3Q8NGY3 331 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 PTX4Q96A99 478 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 STARD4Q96DR4 205 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
PAF1-201ENST00000221265 ADGRG4Q8IZF6 3080 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 A0A0A6YYH2 397 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 WIPF3A6NGB9 483 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 A6NJ64 397 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 FIGNL2A6NMB9 653 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 LEUTXA8MZ59 168 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 WDR1O75083 606 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 RAD51DO75771 328 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 RAB1AP62820 205 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 ECH1Q13011 328 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 Q6ZT83 130 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
PAF1-201ENST00000221265 OR2AE1Q8NHA4 323 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 OPN3Q9H1Y3 402 aaPredicted RBP13.14□□□□□ -0.31
PAF1-201ENST00000221265 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
PAF1-201ENST00000221265 UBE2QL1A1L167 161 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 LINC00862A6NCI5 91 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 M0QYG6 137 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 SIX6O95475 246 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 RAB3DO95716 219 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
PAF1-201ENST00000221265 CGAP01215 116 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 CXCL2P19875 107 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 RAB6AP20340 208 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 GNALP38405 381 aa13.13□□□□□ -0.31
PAF1-201ENST00000221265 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
PAF1-201ENST00000221265 EXOSC2Q13868 293 aaKnown RBP13.13□□□□□ -0.31
PAF1-201ENST00000221265 GRK1Q15835 563 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms