RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KCNMB1Q16558 191 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 GUSBP11Q6P575 273 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 OR2M3Q8NG83 312 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 SEC11CQ9BY50 192 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 RHOFQ9HBH0 211 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 ACKR4Q9NPB9 350 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 MYOTQ9UBF9 498 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 WDR87Q6ZQQ6 2873 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 FOXI3A8MTJ6 420 aaPredicted RBP15.17■□□□□ 0.02
USB1-201ENST00000219281 ECH1Q13011 328 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 IL15RAQ13261 267 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 HIST3H3Q16695 136 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 CHRFAM7AQ494W8 412 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 RPL7L1Q6DKI1 246 aaKnown RBP15.17■□□□□ 0.02
USB1-201ENST00000219281 RAB11FIP2Q7L804 512 aa15.17■□□□□ 0.02
USB1-201ENST00000219281 KLF2Q9Y5W3 355 aaPredicted RBP15.17■□□□□ 0.02
USB1-201ENST00000219281 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 A0A1W2PQM1 296 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 PMS2P1A4D2B8 440 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 F5H5K5 113 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 LRP3O75074 770 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 PET100P0DJ07 73 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 PRF1P14222 555 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 RCC1P18754 421 aaPredicted RBP15.16■□□□□ 0.02
USB1-201ENST00000219281 CLDN17P56750 224 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 LYSMD4Q5XG99 296 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 RHBDD1Q8TEB9 315 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 OR6C1Q96RD1 312 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 ELL3Q9HB65 397 aaPredicted RBP15.16■□□□□ 0.02
USB1-201ENST00000219281 ZNF160Q9HCG1 818 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 ZNF701Q9NV72 531 aaPredicted RBP15.16■□□□□ 0.02
USB1-201ENST00000219281 DNAJB11Q9UBS4 358 aa15.16■□□□□ 0.02
USB1-201ENST00000219281 FIGNL2A6NMB9 653 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 ZFAND5O76080 213 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 FCGR2AP12318 317 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 MUC1P15941 1255 aaPredicted RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 EPHA8P29322 1005 aaPredicted RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 PTGER4P35408 488 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 RPL35P42766 123 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 AKR1D1P51857 326 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 ACY1Q03154 408 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 UBE2V2Q15819 145 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 CPEB2Q7Z5Q1 589 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 EMG1Q92979 244 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 SMIM8Q96KF7 97 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 TAF9BQ9HBM6 251 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 C14orf166Q9Y224 244 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 IGKV1D-8A0A087WSZ0 117 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 PDGFBP01127 241 aaPredicted RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 HKR1P10072 659 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 FAHP16930 419 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 NME2P22392 152 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 NFYBP25208 207 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 LPAR6P43657 344 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 DTX1Q86Y01 620 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 UBALD2Q8IYN6 164 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 SAP25Q8TEE9 199 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 SAT2Q96F10 170 aaPredicted RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 NECAB3Q96P71 396 aaPredicted RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 NRIP2Q9BQI9 281 aa15.15■□□□□ 0.02
USB1-201ENST00000219281 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.15■□□□□ 0.02
USB1-201ENST00000219281 RCC2Q9P258 522 aaKnown RBP15.15■□□□□ 0.02
USB1-201ENST00000219281 AQP7P3A6NL99 342 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 MED6O75586 246 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 SCRG1O75711 98 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 IFNA2P01563 188 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 NAT2P11245 290 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 CAV2P51636 162 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 RSPO4Q2I0M5 234 aaPredicted RBP15.14■□□□□ 0.01
USB1-201ENST00000219281 OR2A2Q6IF42 318 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 WDSUB1Q8N9V3 476 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 ZNF775Q96BV0 537 aaPredicted RBP15.14■□□□□ 0.01
USB1-201ENST00000219281 S100A13Q99584 98 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 GHRLQ9UBU3 117 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 MEMO1Q9Y316 297 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 B3GALT1Q9Y5Z6 326 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 ADAMTS20P59510 1910 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 OR5H15A6NDH6 313 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 SERPINA5P05154 406 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 RBM39Q14498 530 aaKnown RBP15.14■□□□□ 0.01
USB1-201ENST00000219281 PRAMEF20Q5VT98 475 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 SHEQ5VZ18 495 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 PIGTQ969N2 578 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 WDFY4Q6ZS81 3184 aa15.14■□□□□ 0.01
USB1-201ENST00000219281 RALGAPA1Q6GYQ0 2036 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 TOX3O15405 576 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 TLX3O43711 291 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 IGLV3-1P01715 115 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 ZNF708P17019 499 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 THBS4P35443 961 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 RBMXP38159 391 aaKnown RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 RFC3P40938 356 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 ALDH3B1P43353 468 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 RAB13P51153 203 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 CCL7P80098 99 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 IAH1Q2TAA2 248 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 PHYHD1Q5SRE7 291 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms