RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CNOT4O95628 575 aaKnown RBP15.08■□□□□ 0
VRK1-201ENST00000216639 RLN1P04808 185 aa15.08■□□□□ 0
VRK1-201ENST00000216639 ANXA3P12429 323 aa15.08■□□□□ 0
VRK1-201ENST00000216639 CBX5P45973 191 aa15.08■□□□□ 0
VRK1-201ENST00000216639 ZMYND11Q15326 602 aa15.08■□□□□ 0
VRK1-201ENST00000216639 RSU1Q15404 277 aa15.08■□□□□ 0
VRK1-201ENST00000216639 SF3B4Q15427 424 aaKnown RBP eCLIP15.08■□□□□ 08e-7■■■■□ 19.8
VRK1-201ENST00000216639 HIKESHIQ53FT3 197 aa15.08■□□□□ 0
VRK1-201ENST00000216639 RNASE10Q5GAN6 216 aaKnown RBP15.08■□□□□ 0
VRK1-201ENST00000216639 PLCXD3Q63HM9 321 aa15.08■□□□□ 0
VRK1-201ENST00000216639 RTL6Q6ICC9 239 aa15.08■□□□□ 0
VRK1-201ENST00000216639 TFAP2EQ6VUC0 442 aa15.08■□□□□ 0
VRK1-201ENST00000216639 FTMTQ8N4E7 242 aa15.08■□□□□ 0
VRK1-201ENST00000216639 PRRT1Q99946 306 aa15.08■□□□□ 0
VRK1-201ENST00000216639 REPIN1Q9BWE0 567 aaKnown RBP15.08■□□□□ 0
VRK1-201ENST00000216639 PCDHB16Q9NRJ7 776 aa15.08■□□□□ 0
VRK1-201ENST00000216639 PYCARD-AS1I3L0S3 204 aa15.07■□□□□ 0
VRK1-201ENST00000216639 M0QYG6 137 aa15.07■□□□□ 0
VRK1-201ENST00000216639 SULT1A3P0DMM9 295 aa15.07■□□□□ 0
VRK1-201ENST00000216639 SULT1A4P0DMN0 295 aa15.07■□□□□ 0
VRK1-201ENST00000216639 SDHBP21912 280 aa15.07■□□□□ 0
VRK1-201ENST00000216639 RAD52P43351 418 aa15.07■□□□□ 0
VRK1-201ENST00000216639 PLAC9Q5JTB6 97 aa15.07■□□□□ 0
VRK1-201ENST00000216639 IDO2Q6ZQW0 420 aa15.07■□□□□ 0
VRK1-201ENST00000216639 LIX1LQ8IVB5 337 aa15.07■□□□□ 0
VRK1-201ENST00000216639 BPIFB2Q8N4F0 458 aa15.07■□□□□ 0
VRK1-201ENST00000216639 CSNK2A3Q8NEV1 391 aa15.07■□□□□ 0
VRK1-201ENST00000216639 TINAGL1Q9GZM7 467 aaPredicted RBP15.07■□□□□ 0
VRK1-201ENST00000216639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.07■□□□□ 02e-6■■■■□ 21.7
VRK1-201ENST00000216639 ARHGAP21Q5T5U3 1957 aa15.06■□□□□ 0
VRK1-201ENST00000216639 MFNGO00587 321 aa15.06■□□□□ 0
VRK1-201ENST00000216639 HPXP02790 462 aa15.06■□□□□ 0
VRK1-201ENST00000216639 CCL2P13500 99 aa15.06■□□□□ 0
VRK1-201ENST00000216639 ANXA7P20073 488 aaKnown RBP15.06■□□□□ 0
VRK1-201ENST00000216639 PRSS12P56730 875 aa15.06■□□□□ 0
VRK1-201ENST00000216639 UBE2NP61088 152 aaKnown RBP15.06■□□□□ 0
VRK1-201ENST00000216639 ARFRP1Q13795 201 aa15.06■□□□□ 0
VRK1-201ENST00000216639 GK2Q14410 553 aaPredicted RBP15.06■□□□□ 0
VRK1-201ENST00000216639 Q6ZS92 163 aa15.06■□□□□ 0
VRK1-201ENST00000216639 GCNT2Q8N0V5 402 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR11H7Q8NGC8 314 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR5L1Q8NGL2 311 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR5M9Q8NGP3 310 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR10K1Q8NGX5 313 aa15.06■□□□□ 0
VRK1-201ENST00000216639 CCDC107Q8WV48 283 aa15.06■□□□□ 0
VRK1-201ENST00000216639 ARHGAP5-AS1Q96IT6 56 aa15.06■□□□□ 0
VRK1-201ENST00000216639 TAAR6Q96RI8 345 aa15.06■□□□□ 0
VRK1-201ENST00000216639 UBE2QL1A1L167 161 aa15.06■□□□□ 0
VRK1-201ENST00000216639 SERPINE3A8MV23 424 aa15.06■□□□□ 0
VRK1-201ENST00000216639 BLVRBP30043 206 aaPredicted RBP15.06■□□□□ 0
VRK1-201ENST00000216639 TMEM50BP56557 158 aa15.06■□□□□ 0
VRK1-201ENST00000216639 FOXC1Q12948 553 aa15.06■□□□□ 0
VRK1-201ENST00000216639 PPA1Q15181 289 aa15.06■□□□□ 0
VRK1-201ENST00000216639 GUSBP1Q15486 140 aa15.06■□□□□ 0
VRK1-201ENST00000216639 ACTBL2Q562R1 376 aa15.06■□□□□ 0
VRK1-201ENST00000216639 ZNF626Q68DY1 528 aa15.06■□□□□ 0
VRK1-201ENST00000216639 Q6ZT83 130 aa15.06■□□□□ 0
VRK1-201ENST00000216639 CNEP1R1Q8N9A8 125 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR4S1Q8NGB4 309 aa15.06■□□□□ 0
VRK1-201ENST00000216639 OR6K3Q8NGY3 331 aa15.06■□□□□ 0
VRK1-201ENST00000216639 CAPSLQ8WWF8 208 aa15.06■□□□□ 0
VRK1-201ENST00000216639 EIF3KQ9UBQ5 218 aaKnown RBP15.06■□□□□ 0
VRK1-201ENST00000216639 ZNF69Q9UC07 566 aa15.06■□□□□ 0
VRK1-201ENST00000216639 KCNK7Q9Y2U2 307 aa15.06■□□□□ 0
VRK1-201ENST00000216639 SSX5O60225 188 aa15.05■□□□□ -0
VRK1-201ENST00000216639 HTR3BO95264 441 aa15.05■□□□□ -0
VRK1-201ENST00000216639 IFNA6P05013 189 aa15.05■□□□□ -0
VRK1-201ENST00000216639 MPZP25189 248 aa15.05■□□□□ -0
VRK1-201ENST00000216639 GZMKP49863 264 aa15.05■□□□□ -0
VRK1-201ENST00000216639 MRPL49Q13405 166 aaKnown RBP15.05■□□□□ -0
VRK1-201ENST00000216639 TBC1D28Q2M2D7 210 aa15.05■□□□□ -0
VRK1-201ENST00000216639 ACSF3Q4G176 576 aaPredicted RBP15.05■□□□□ -0
VRK1-201ENST00000216639 ASCL4Q6XD76 172 aa15.05■□□□□ -0
VRK1-201ENST00000216639 MDP1Q86V88 176 aa15.05■□□□□ -0
VRK1-201ENST00000216639 GVQW1Q8N7I0 195 aa15.05■□□□□ -0
VRK1-201ENST00000216639 SLC30A7Q8NEW0 376 aa15.05■□□□□ -0
VRK1-201ENST00000216639 PXT1Q8NFP0 134 aa15.05■□□□□ -0
VRK1-201ENST00000216639 OR56B2PQ8NGI1 322 aa15.05■□□□□ -0
VRK1-201ENST00000216639 SEC22CQ9BRL7 303 aa15.05■□□□□ -0
VRK1-201ENST00000216639 PAPOLGQ9BWT3 736 aaKnown RBP15.05■□□□□ -0
VRK1-201ENST00000216639 ALX4Q9H161 411 aaPredicted RBP15.05■□□□□ -0
VRK1-201ENST00000216639 SLC2A8Q9NY64 477 aa15.05■□□□□ -0
VRK1-201ENST00000216639 PTTG3PQ9NZH4 202 aa15.05■□□□□ -0
VRK1-201ENST00000216639 IGKV1-27A0A075B6S5 117 aa15.04■□□□□ -0
VRK1-201ENST00000216639 MEIKINA0A087WXM9 373 aa15.04■□□□□ -0
VRK1-201ENST00000216639 ZNF850A8MQ14 1090 aa15.04■□□□□ -0
VRK1-201ENST00000216639 FOXI3A8MTJ6 420 aaPredicted RBP15.04■□□□□ -0
VRK1-201ENST00000216639 SPRY1O43609 319 aaPredicted RBP15.04■□□□□ -0
VRK1-201ENST00000216639 CA11O75493 328 aa15.04■□□□□ -0
VRK1-201ENST00000216639 CRYABP02511 175 aaKnown RBP15.04■□□□□ -0
VRK1-201ENST00000216639 ZNF735P0CB33 412 aa15.04■□□□□ -0
VRK1-201ENST00000216639 HOXB1P14653 301 aaPredicted RBP15.04■□□□□ -0
VRK1-201ENST00000216639 IGHV1-2P23083 117 aa15.04■□□□□ -0
VRK1-201ENST00000216639 SCGB2B2Q4G0G5 96 aa15.04■□□□□ -0
VRK1-201ENST00000216639 RPUSD3Q6P087 351 aaKnown RBP15.04■□□□□ -0
VRK1-201ENST00000216639 MRPS24Q96EL2 167 aaKnown RBP15.04■□□□□ -0
VRK1-201ENST00000216639 HYLS1Q96M11 299 aa15.04■□□□□ -0
VRK1-201ENST00000216639 OCSTAMPQ9BR26 566 aa15.04■□□□□ -0
VRK1-201ENST00000216639 PECRQ9BY49 303 aa15.04■□□□□ -0
VRK1-201ENST00000216639 RANBP3Q9H6Z4 567 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms