RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 T-ENOLP0DO92 83 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 NOVP48745 357 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 DAPP51397 102 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FAM3AP98173 230 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 IL24Q13007 206 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 OSR2Q8N2R0 312 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 OR10A7Q8NGE5 316 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FAM216AQ8WUB2 273 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 HSD17B10Q99714 261 aaKnown RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ASH2LQ9UBL3 628 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GPM6AP51674 278 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ARSDP51689 593 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 NKX2-5P52952 324 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 AANATQ16613 207 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 STUMQ69YW2 141 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FAHD1Q6P587 224 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SCD5Q86SK9 330 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 THAP3Q8WTV1 239 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 NIPSNAP1Q9BPW8 284 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 C1QTNF6Q9BXI9 259 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 LRRTM1Q86UE6 522 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GATSQ8NAP1 163 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 OR4S2Q8NH73 311 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ERGIC1Q969X5 290 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ADGRG7Q96K78 797 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PKIBQ9C010 78 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SMG9Q9H0W8 520 aaKnown RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 P2RY12Q9H244 342 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SMIM30A4D0T7 59 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 POM121CA8CG34 1229 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GCGP01275 180 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 NDUFB7P17568 137 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 HRH1P35367 487 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PSMB10P40306 273 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 DSCR4P56555 118 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FABP9Q0Z7S8 132 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 RTN4IP1Q8WWV3 396 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CCDC74AQ96AQ1 378 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TTTY10Q9BZA0 68 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 Q9N2K0 584 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 LY75O60449 1722 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SNAI1O95863 264 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CD80P33681 288 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GZMKP49863 264 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PAFAH1B2P68402 229 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CCDC144NLQ6NUI1 221 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CDHR3Q6ZTQ4 885 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CDCP1Q9H5V8 836 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CALHM2Q9HA72 323 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PSENENQ9NZ42 101 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 K7ERQ8 282 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ENSAO43768 121 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GPX5O75715 221 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HLA-GP17693 338 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 KIR3DL2P43630 455 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LRRC18Q8N456 261 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ADPRHL1Q8NDY3 354 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GNB4Q9HAV0 340 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MYOZ1Q9NP98 299 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LHX3Q9UBR4 397 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 OSGIN2Q9Y236 505 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 FBLL1A6NHQ2 334 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CDS2O95674 445 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CD27P26842 260 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NAAAQ02083 359 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HES1Q14469 280 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MARCH8Q5T0T0 291 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM102Q8N9M5 508 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TSACCQ96A04 125 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CLDN23Q96B33 292 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GPR137Q96N19 417 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TPPP3Q9BW30 176 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 DNAJC25-GNG10A0A024R161 153 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SEMA7AO75326 666 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 C19orf57Q0VDD7 668 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM52BQ4KMG9 183 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SYT9Q86SS6 491 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF596Q8TC21 504 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SMIM12Q96EX1 92 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MSLNLQ96KJ4 702 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GLIPR2Q9H4G4 154 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 RASL12Q9NYN1 266 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MRPL15Q9P015 296 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 FBXL17Q9UF56 701 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 PTPRQQ9UMZ3 2332 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CTDSP2O14595 271 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 KLK8O60259 260 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 FCER1GP30273 86 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SSTR2P30874 369 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GALNSP34059 522 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CCR6P51684 374 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 PCBP4P57723 403 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CDK5R1Q15078 307 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HAGHQ16775 308 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 UBAC2Q8NBM4 344 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 RPS4Y2Q8TD47 263 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms