RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fam234bQ8BYI8 624 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cavin3Q91VJ2 260 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Glyr1Q922P9 546 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mrpl24Q9CQ06 216 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Adad2Q9D5P4 478 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hoga1Q9DCU9 321 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfp69A2A761 587 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ces2gE9PV38 560 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tcstv3O70518 169 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 AF067061O70616 171 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pcp2P12660 120 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fcgr1P26151 404 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem18Q3TUD9 140 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1225Q7TR01 311 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1137Q7TR40 310 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1111Q7TR55 312 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Impad1Q80V26 356 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 SccpdhQ8R127 429 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ubac2Q8R1K1 345 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1449Q8VEV8 314 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem218Q9CQ44 115 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Q9CQT6 229 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmbim7Q9D592 302 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Igkv10-95A0A0G2JFY3 115 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 AregP31955 248 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tubg1P83887 451 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 MaoaQ64133 526 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1500Q7TQQ3 311 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Serinc5Q8BHJ6 461 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pias2Q8C5D8 621 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Peli1Q8C669 418 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ccdc115Q8VE99 180 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Samd8Q9DA37 478 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gstk1Q9DCM2 226 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Il36aQ9JLA2 160 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 BC051665E9Q623 330 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr746E9Q840 314 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 EndogO08600 294 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Bpifa2P07743 235 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hist1h1cP15864 212 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PlgP20918 812 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ptpn6P29351 595 aaKnown RBP9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 JkampQ8BI36 311 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Aph1aQ8BVF7 265 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lyrm2Q8R033 88 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 0610009B22RikQ8R3W2 140 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cd209cQ91ZW9 178 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ackr4Q924I3 350 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ndufb7Q9CR61 137 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lamp5Q9D387 280 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 P2rx4Q9JJX6 388 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Skp2Q9Z0Z3 424 aa9.32□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Trav10nA0A075B622 114 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Trav10A0A075B642 114 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm21863J3KMP8 111 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hoxb3P09026 433 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Phxr1P15973 60 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cpne2P59108 548 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Azgp1Q64726 307 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 BocQ6AZB0 1110 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pif1Q80SX8 650 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Crb2Q80YA8 1282 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ip6k3Q8BWD2 396 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc38a2Q8CFE6 504 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 MrgprdQ91ZB8 321 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Maf1Q9D0U6 258 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 SrfQ9JM73 504 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Six6Q9QZ28 246 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 MvkQ9R008 395 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm12117V9GXK0 151 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Col4a3Q9QZS0 1669 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ube2dnl2A2AFH2 155 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Dll3O88516 592 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PiglQ5SX19 252 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zdhhc8Q5Y5T5 762 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tle4Q62441 773 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Bhlhe23Q8BGW3 223 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fam210aQ8BGY7 273 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lmf2Q8C3X8 702 aaKnown RBP9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Scgb2b27Q8R1E9 112 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr99Q8VFE4 305 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfand2bQ91X58 257 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem186Q9CR76 216 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hnf4gQ9WUU6 408 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Unc13cQ8K0T7 2210 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ccdc9bA3KGF9 545 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r138D3YTY2 306 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm8693E9PW18 306 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm21970F6XX07 295 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm4498K9J7G4 306 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r118L7N273 306 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ccl4P14097 92 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rab6aP35279 208 aaKnown RBP9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Acp5Q05117 327 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm826Q3UQ74 109 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fstl4Q5STE3 841 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 RflnbQ5SVD0 216 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr988Q7TRA1 309 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Clec2hQ8C1T8 218 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 MepeQ8K4L6 441 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms