RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 Q499Y3 187 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 ZMAT1Q5H9K5 638 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 RGS7BPQ6MZT1 257 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 FBXW12Q6X9E4 464 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TMEM91Q6ZNR0 172 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 ANKRD13BQ86YJ7 626 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 C1orf174Q8IYL3 243 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 PLPP7Q8NBV4 271 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CCDC54Q8NEL0 328 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 NUP37Q8NFH4 326 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 SEMA6DQ8NFY4 1073 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 OR56B2PQ8NGI1 322 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TMEM106AQ96A25 262 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 MARS2Q96GW9 593 aaKnown RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 DERL3Q96Q80 235 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CENPOQ9BU64 300 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 RBM38Q9H0Z9 239 aaKnown RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 OCEL1Q9H607 264 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TUBG2Q9NRH3 451 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CA10Q9NS85 328 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 ZNF275Q9NSD4 429 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 POU2F3Q9UKI9 436 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 PIGLQ9Y2B2 252 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CEPT1Q9Y6K0 416 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 V9GYS6 101 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TRBV5-7A0A0A0MS05 114 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 A0A1W2PPK0 400 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 A6NIN4 97 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 DHRS7CA6NNS2 312 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 SHISA9B4DS77 424 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 MTRF1O75570 445 aaKnown RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 SC5DO75845 299 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 CD2P06729 351 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 SELEP16581 610 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 FAHP16930 419 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 GALP22466 123 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 ACKR3P25106 362 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 CALRP27797 417 aaKnown RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 GCH1P30793 250 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 THBS4P35443 961 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 GLRXP35754 106 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 RIPPLY1Q0D2K3 151 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 MSMPQ1L6U9 139 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 ZNF718Q3SXZ3 478 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 HSD17B12Q53GQ0 312 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 TMEM255AQ5JRV8 349 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 FAM27D1Q5T7N8 215 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 MBNL2Q5VZF2 373 aaKnown RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 C22orf42Q6IC83 251 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 OR2T2Q6IF00 324 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 Q6ZSR3 168 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 BHLHE23Q8NDY6 225 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 SGMS2Q8NHU3 365 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 KLF14Q8TD94 323 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 RAB2BQ8WUD1 216 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 THRSPQ92748 146 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 NEUROG1Q92886 237 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 FGGYQ96C11 551 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 CMBLQ96DG6 245 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 ADAT3Q96EY9 351 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 TMEM204Q9BSN7 226 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 NOX4Q9NPH5 578 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 TXNL4BQ9NX01 149 aaKnown RBP8.02□□□□□ -1.13
PHGDH-228ENST00000641847 TAS2R4Q9NYW5 299 aa8.02□□□□□ -1.13
PHGDH-228ENST00000641847 ZNF816-ZNF321PA0A0X1KG74 233 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 A0A1W2PPW3 197 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 CD300LBA8K4G0 201 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 H3BMQ9 156 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 PIN1P1O15428 100 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 KCNAB3O43448 404 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 TIMM8AO60220 97 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-228ENST00000641847 ARL6IP5O75915 188 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 PLAUP00749 431 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 UCHL1P09936 223 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 RAC2P15153 192 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 FSTP19883 344 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 MYL9P24844 172 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 FGF9P31371 208 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-228ENST00000641847 TGFBR1P36897 503 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 GNALP38405 381 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 MAP2K3P46734 347 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 FABP6P51161 128 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 TMBIM6P55061 237 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 DSCR9P59020 149 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 NCS1P62166 190 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 PSG7Q13046 419 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 CTF1Q16619 201 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 TMEM249Q2WGJ8 235 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 ZNF672Q499Z4 452 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-228ENST00000641847 ZBTB37Q5TC79 503 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 CYB5R2Q6BCY4 276 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 ASPHD2Q6ICH7 369 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 UNQ9370/PRO34162Q6UXP9 181 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 GDPGP1Q6ZNW5 385 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 OR5AS1Q8N127 324 aa8.01□□□□□ -1.13
PHGDH-228ENST00000641847 CSNK2A3Q8NEV1 391 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms