RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 TRDV1A0A1B0GX56 115 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 FAM230AA0A1W2PPH8 454 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 A0A1W2PPK0 400 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 A6NIN4 97 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 OR5B21A6NL26 309 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 A6NLC8 198 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 SULT1B1O43704 296 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 CST4P01036 141 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 NAT2P11245 290 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 TNFRSF1AP19438 455 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 TGFBR2P37173 567 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 PPOXP50336 477 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 PSMD7P51665 324 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 ATP1B3P54709 279 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 TNFAIP6P98066 277 aaPredicted RBP11.08□□□□□ -0.64
PHGDH-218ENST00000641491 SSX1Q16384 188 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 CEP78Q5JTW2 689 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 GPR107Q5VW38 600 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 C22orf42Q6IC83 251 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 LHFPL2Q6ZUX7 228 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 SATL1Q86VE3 508 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 LRP11Q86VZ4 500 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 OR10AD1Q8NGE0 317 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 RPS4Y2Q8TD47 263 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 NPRL2Q8WTW4 380 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 SPSB1Q96BD6 273 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 RNF170Q96K19 258 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 DERL3Q96Q80 235 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 SAP30LQ9HAJ7 183 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 MSL2Q9HCI7 577 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 TAS2R4Q9NYW5 299 aa11.08□□□□□ -0.64
PHGDH-218ENST00000641491 hCG_1807616A0A1W2PRN6 198 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 MEGF11A6BM72 1044 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 C5orf63A6NC05 138 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 LRRC30A6NM36 301 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 MAS1P04201 325 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 GADD45AP24522 165 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 DNASE1P24855 282 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 ACKR3P25106 362 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 LOXP28300 417 aaPredicted RBP11.07□□□□□ -0.64
PHGDH-218ENST00000641491 BDKRB2P30411 391 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 FUT6P51993 359 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 FABP5Q01469 135 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 TESK1Q15569 626 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 GLT8D1Q68CQ7 371 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 UTS2BQ765I0 119 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 OR1M1Q8NGA1 313 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 TRMT10AQ8TBZ6 339 aaKnown RBP11.07□□□□□ -0.64
PHGDH-218ENST00000641491 RAB2BQ8WUD1 216 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 SLC30A2Q9BRI3 323 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 FUNDC2Q9BWH2 189 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 CACNG6Q9BXT2 260 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 FAM192AQ9GZU8 254 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 TPK1Q9H3S4 243 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 SNTG1Q9NSN8 517 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
PHGDH-218ENST00000641491 TMEM210A6NLX4 147 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 C17orf100A8MU93 164 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 TFAP2AP05549 437 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 PRF1P14222 555 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 ATF1P18846 271 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 FSTP19883 344 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 AZGP1P25311 298 aaKnown RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 ALDH3B2P48448 385 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 RBP2P50120 134 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 GPM6AP51674 278 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 LSM3P62310 102 aaKnown RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 GNG3P63215 75 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 DDI2Q5TDH0 399 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 ZNF573Q86YE8 665 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 OR5A2Q8NGI9 324 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 LILRB1Q8NHL6 650 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 RGP1Q92546 391 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 HPS1Q92902 700 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 FOXRED1Q96CU9 486 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 YIPF6Q96EC8 236 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 OR51E2Q9H255 320 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 FN3KRPQ9HA64 309 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 PLGRKTQ9HBL7 147 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 TMEM138Q9NPI0 162 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 MYEF2Q9P2K5 600 aaKnown RBP11.06□□□□□ -0.64
PHGDH-218ENST00000641491 POLDIP2Q9Y2S7 368 aa11.06□□□□□ -0.64
PHGDH-218ENST00000641491 SMIM31A0A1B0GVY4 71 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 ZNF732B4DXR9 585 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 GRPP07492 148 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 UCHL1P09936 223 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 SRMP19623 302 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms