RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TRAPPC1Q9Y5R8 145 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 CBY3A6NI87 242 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 SFT2D2O95562 160 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 SELENOPP49908 381 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 NOVA1P51513 510 aaKnown RBP16.6■□□□□ 0.25
SCARB2-213ENST00000638680 TMEM267Q0VDI3 215 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-213ENST00000638680 AMER3Q8N944 861 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 MMP25Q9NPA2 562 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 ZGLP1P0C6A0 271 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 GPM6AP51674 278 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 ROBO4Q8WZ75 1007 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 BPIFB3P59826 476 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 PPP1CBP62140 327 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 MVB12AQ96EY5 273 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 C1QAP02745 245 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 UBAC2Q8NBM4 344 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 OR10G3Q8NGC4 313 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 MRGPRX1Q96LB2 322 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 EGLN1Q9GZT9 426 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 IL21Q9HBE4 155 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 MMP24Q9Y5R2 645 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-213ENST00000638680 HMGA2P52926 109 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 SLC37A1P57057 533 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 RANP62826 216 aaKnown RBP16.59■□□□□ 0.25
SCARB2-213ENST00000638680 S1PR3Q99500 378 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 SHISA8B8ZZ34 492 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 METAP1P53582 386 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 LIMK1P53667 647 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 ERHP84090 104 aaKnown RBP16.59■□□□□ 0.25
SCARB2-213ENST00000638680 TCTN1Q2MV58 587 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 YBX1P67809 324 aaKnown RBP16.59■□□□□ 0.25
SCARB2-213ENST00000638680 RAB32Q13637 225 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 FAM24BQ8N5W8 94 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 EXTL1Q92935 676 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 YIF1AO95070 293 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF66Q6ZN08 573 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 TSEN54Q7Z6J9 526 aaKnown RBP16.59■□□□□ 0.25
SCARB2-213ENST00000638680 MRPS24Q96EL2 167 aaKnown RBP16.59■□□□□ 0.25
SCARB2-213ENST00000638680 CCDC74BQ96LY2 380 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 ABHD1Q96SE0 405 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 TMPRSS13Q9BYE2 586 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 CHST6Q9GZX3 395 aa16.59■□□□□ 0.25
SCARB2-213ENST00000638680 LEUTXA8MZ59 168 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 ERVFC1-1P60608 527 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 PDCD1Q15116 288 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 KLHDC1Q8N7A1 406 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 COMMD5Q9GZQ3 224 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 MPC2O95563 127 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 SULT1A3P0DMM9 295 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 SULT1A4P0DMN0 295 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 HIST1H1DP16402 221 aaKnown RBP16.58■□□□□ 0.25
SCARB2-213ENST00000638680 FAM162BQ5T6X4 162 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 ADPRHL1Q8NDY3 354 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 DUSP18Q8NEJ0 188 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 VAMP8Q9BV40 100 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 HDGFL3Q9Y3E1 203 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 V9GYH0 126 aa16.58■□□□□ 0.25
SCARB2-213ENST00000638680 MED19A0JLT2 244 aaPredicted RBP16.58■□□□□ 0.24
SCARB2-213ENST00000638680 MPPED2Q15777 294 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 RNF165Q6ZSG1 346 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 PP6455Q8WZ26 134 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 ZG16BQ96DA0 208 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 ZNF835Q9Y2P0 537 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 F2RP25116 425 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 FMODQ06828 376 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 TMEM37Q8WXS4 190 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 TRIB1Q96RU8 372 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 EDEM2Q9BV94 578 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 CCR5P51681 352 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 RPS16P62249 146 aaKnown RBP16.58■□□□□ 0.24
SCARB2-213ENST00000638680 C9orf152Q5JTZ5 239 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 CD300LDQ6UXZ3 194 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 FBXO34Q9NWN3 711 aa16.58■□□□□ 0.24
SCARB2-213ENST00000638680 DNAJB12Q9NXW2 375 aaKnown RBP16.58■□□□□ 0.24
SCARB2-213ENST00000638680 ANKRD20A5PA0PJZ0 165 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 PMCHP20382 165 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 PPIAP62937 165 aaKnown RBP16.57■□□□□ 0.24
SCARB2-213ENST00000638680 FBXL14Q8N1E6 418 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 SCMH1Q96GD3 660 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 C4orf45Q96LM5 186 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 SHROOM3Q8TF72 1996 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 DBX1A6NMT0 343 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 PAX6P26367 422 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 RPS23P62266 143 aaKnown RBP16.57■□□□□ 0.24
SCARB2-213ENST00000638680 TOMM20LQ6UXN7 152 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 ZADH2Q8N4Q0 377 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 CYB5R1Q9UHQ9 305 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 ZNF117Q03924 483 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 WSB1Q9Y6I7 421 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 SEZ6L2Q6UXD5 910 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 GALMQ96C23 342 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 ADAM20O43506 726 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 COX7A2P2O60397 106 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 TBX19O60806 448 aa16.57■□□□□ 0.24
SCARB2-213ENST00000638680 GALR1P47211 349 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms