RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 C14orf119Q9NWQ9 140 aa18.25■□□□□ 0.51
SCN1B-206ENST00000638536 MPC1Q9Y5U8 109 aa18.25■□□□□ 0.51
SCN1B-206ENST00000638536 V9GYS6 101 aa18.25■□□□□ 0.51
SCN1B-206ENST00000638536 PPIAL4EA0A075B759 164 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 ZNF816-ZNF321PA0A0X1KG74 233 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 A6NLC8 198 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 LRRC30A6NM36 301 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 PPIAL4DF5H284 164 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 MSMBP08118 114 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 PPIAL4FP0DN26 164 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 EGR1P18146 543 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 MDH2P40926 338 aaKnown RBP18.24■□□□□ 0.51
SCN1B-206ENST00000638536 RAB40BQ12829 278 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 GCSAMQ8N6F7 178 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 DEFB108BQ8NET1 73 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 C4orf36Q96KX1 117 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 PATZ1Q9HBE1 687 aaKnown RBP18.24■□□□□ 0.51
SCN1B-206ENST00000638536 ERVK13-1Q9NX77 482 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 RNF7Q9UBF6 113 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 RPL36Q9Y3U8 105 aaKnown RBP18.24■□□□□ 0.51
SCN1B-206ENST00000638536 PPIAL4AQ9Y536 164 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 PCDHGB1Q9Y5G3 927 aa18.24■□□□□ 0.51
SCN1B-206ENST00000638536 CEACAM18A8MTB9 384 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 J3QLW9 94 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 ZNF19P17023 458 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 CD80P33681 288 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 CAPGP40121 348 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 RIPPLY1Q0D2K3 151 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 GALEQ14376 348 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 CR1LQ2VPA4 569 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 LYPD2Q6UXB3 125 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 Q6ZSR3 168 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 FTMTQ8N4E7 242 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 OR11L1Q8NGX0 322 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 RPL3LQ92901 407 aaKnown RBP18.23■□□□□ 0.51
SCN1B-206ENST00000638536 TMEM186Q96B77 213 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 RAB39BQ96DA2 213 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 PELI1Q96FA3 418 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 RNF170Q96K19 258 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 ALG8Q9BVK2 526 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 HIF1ANQ9NWT6 349 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 FRRS1LQ9P0K9 344 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 ANXA2P2A6NMY6 339 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 CDIPTO14735 213 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 FADS2O95864 444 aaKnown RBP18.23■□□□□ 0.51
SCN1B-206ENST00000638536 LHBP01229 141 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 IRF2P14316 349 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 CCL1P22362 96 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 DVL1P1P54792 670 aaPredicted RBP18.23■□□□□ 0.51
SCN1B-206ENST00000638536 LCN2P80188 198 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 ZNF404Q494X3 552 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 FAM120AOSQ5T036 256 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 FAM220AQ7Z4H9 259 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 ZDHHC23Q8IYP9 409 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 C1orf87Q8N0U7 546 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 KLHL36Q8N4N3 616 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 OR2G2Q8NGZ5 317 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 SEH1LQ96EE3 360 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 MICU1Q9BPX6 476 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 TMEM160Q9NX00 188 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 PCDHB10Q9UN67 800 aa18.23■□□□□ 0.51
SCN1B-206ENST00000638536 hCG_1807616A0A1W2PRN6 198 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 F5H0A9 414 aaPredicted RBP18.22■□□□□ 0.51
SCN1B-206ENST00000638536 WNT2P09544 360 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 ATP6V1B1P15313 513 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 GPM6AP51674 278 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 FAM76BQ5HYJ3 339 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 WDR82Q6UXN9 313 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 MOB3CQ70IA8 216 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 THAP5Q7Z6K1 395 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 SPICQ8N5J4 248 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 OR51F2Q8NH61 342 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 TFAP2CQ92754 450 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 TLNRD1Q9H1K6 362 aa18.22■□□□□ 0.51
SCN1B-206ENST00000638536 E9PI62 339 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 H0YAE9 185 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 LIMS3P0CW19 117 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 LIMS4P0CW20 117 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 AQP4P55087 323 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 MZT1Q08AG7 82 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 SNCBQ16143 134 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 KCTD8Q6ZWB6 473 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 DOK3Q7L591 496 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 KCTD20Q7Z5Y7 419 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 PRIMA1Q86XR5 153 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 RTL8AQ9BWD3 113 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 FGF20Q9NP95 211 aaPredicted RBP18.21■□□□□ 0.51
SCN1B-206ENST00000638536 GPR173Q9NS66 373 aa18.21■□□□□ 0.51
SCN1B-206ENST00000638536 ATRQ13535 2644 aa18.21■□□□□ 0.5
SCN1B-206ENST00000638536 MTRF1O75570 445 aaKnown RBP18.2■□□□□ 0.5
SCN1B-206ENST00000638536 IL18R1Q13478 541 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 CEACAM21Q3KPI0 293 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 KLHL22Q53GT1 634 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 TMEM42Q69YG0 159 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 GLCCI1Q86VQ1 547 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 MUC20Q8N307 709 aaPredicted RBP18.2■□□□□ 0.5
SCN1B-206ENST00000638536 SCCPDHQ8NBX0 429 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 SETD9Q8NE22 299 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 OR10AC1Q8NH08 325 aa18.2■□□□□ 0.5
SCN1B-206ENST00000638536 LRRC29Q8WV35 223 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms