RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GPR35Q9HC97 309 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 PLA2G3Q9NZ20 509 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 RAD51DO75771 328 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 IFNA6P05013 189 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 TBPP20226 339 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 SRYQ05066 204 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 RIPPLY2Q5TAB7 128 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 LINC00696Q6ZRV3 163 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 SULF2Q8IWU5 870 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 SEMA6DQ8NFY4 1073 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 OR4K15Q8NH41 348 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 ABI3Q9P2A4 366 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 B4GALT7Q9UBV7 327 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 IL17BQ9UHF5 180 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 MCRIP1C9JLW8 97 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 LINC01387J3KSC0 135 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 RGS11O94810 467 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 IFNA7P01567 189 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 HLA-AP01891 365 aaKnown RBP18.79■□□□□ 0.6
CLN6-224ENST00000638076 SERPINA2P20848 420 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 ACKR3P25106 362 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 PSG4Q00888 419 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 REEP6Q96HR9 211 aa18.79■□□□□ 0.6
CLN6-224ENST00000638076 OR6C6A6NF89 314 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 MFNGO00587 321 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 NOS1APO75052 506 aaPredicted RBP18.78■□□□□ 0.6
CLN6-224ENST00000638076 TNFSF15O95150 251 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 CFDP00746 253 aaPredicted RBP18.78■□□□□ 0.6
CLN6-224ENST00000638076 HPNP05981 417 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 MGMTP16455 207 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 HTR5AP47898 357 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 SLC16A14Q7RTX9 510 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 FAM89BQ8N5H3 189 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 ZDHHC22Q8N966 263 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 FGFBP3Q8TAT2 258 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 S100A13Q99584 98 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 CDC6Q99741 560 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 GPR173Q9NS66 373 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 TIMM10BQ9Y5J6 103 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 OR2AT4A6NND4 320 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 LCATP04180 440 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 C4BPBP20851 252 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 LHX2P50458 406 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 SEC61A1P61619 476 aaKnown RBP18.78■□□□□ 0.6
CLN6-224ENST00000638076 PNLIPRP3Q17RR3 467 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 SLC25A42Q86VD7 318 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 STEAP2Q8NFT2 490 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 ANAPC10Q9UM13 185 aa18.78■□□□□ 0.6
CLN6-224ENST00000638076 FAM166BA8MTA8 275 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 ARPC5O15511 151 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 IGHV3-9P01782 118 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 MICBQ29980 383 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 LY6G6FQ5SQ64 297 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 PLXDC2Q6UX71 529 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 GALNTL5Q7Z4T8 443 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 TTTY12Q9BZ98 90 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 OR2H1Q9GZK4 316 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 ELL3Q9HB65 397 aaPredicted RBP18.77■□□□□ 0.6
CLN6-224ENST00000638076 TMEM9BQ9NQ34 198 aa18.77■□□□□ 0.6
CLN6-224ENST00000638076 FXYD6-FXYD2A0A087WZ82 144 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 ZNF806P0C7X5 589 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 NAT1P18440 290 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 CD34P28906 385 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 MAGEA5P43359 124 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 ARFRP1Q13795 201 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 CLVS2Q5SYC1 327 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 SKA3Q8IX90 412 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 TMEM45BQ96B21 275 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 FXYD6Q9H0Q3 95 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 WNT5BQ9H1J7 359 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 UBQLN2Q9UHD9 624 aa18.77■□□□□ 0.59
CLN6-224ENST00000638076 NOSIPQ9Y314 301 aaKnown RBP18.77■□□□□ 0.59
CLN6-224ENST00000638076 NOP16Q9Y3C1 178 aaKnown RBP18.77■□□□□ 0.59
CLN6-224ENST00000638076 HMSDA8MTL9 139 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 SNAPC5O75971 98 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 PRSS12P56730 875 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 AIMP2Q13155 320 aaKnown RBP18.76■□□□□ 0.59
CLN6-224ENST00000638076 PPP1R1AQ13522 171 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 KRTAP27-1Q3LI81 207 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 ASB13Q8WXK3 278 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 OCSTAMPQ9BR26 566 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 CELSR3Q9NYQ7 3312 aa18.76■□□□□ 0.59
CLN6-224ENST00000638076 DHRS7CA6NNS2 312 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 MRPL33O75394 65 aaKnown RBP18.75■□□□□ 0.59
CLN6-224ENST00000638076 ZBTB25P24278 435 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 CLDN18P56856 261 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 PCBD1P61457 104 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 RIPPLY1Q0D2K3 151 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 TSPO2Q5TGU0 170 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 FBXW5Q969U6 566 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 SLC6A15Q9H2J7 730 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 FOXI3A8MTJ6 420 aaPredicted RBP18.75■□□□□ 0.59
CLN6-224ENST00000638076 BLVRBP30043 206 aaPredicted RBP18.75■□□□□ 0.59
CLN6-224ENST00000638076 SORDQ00796 357 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 LYG2Q86SG7 212 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 FN3KRPQ9HA64 309 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 MAB21L2Q9Y586 359 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 KNTC1P50748 2209 aa18.75■□□□□ 0.59
CLN6-224ENST00000638076 MTCP1P56278 107 aa18.74■□□□□ 0.59
CLN6-224ENST00000638076 GMFBP60983 142 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms