RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FAM209AQ5JX71 171 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 C22orf42Q6IC83 251 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 CFAP77Q6ZQR2 320 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 COLCA1Q6ZS62 124 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 SLC16A9Q7RTY1 509 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 KCTD20Q7Z5Y7 419 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 MFSD4AQ8N468 514 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.6□□□□□ -1.35
PNKP-229ENST00000637897 SLC26A10Q8NG04 563 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 OR6K6Q8NGW6 343 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 FNDC8Q8TC99 324 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 SNX33Q8WV41 574 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 AP3S1Q92572 193 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 CCL17Q92583 94 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 TMEM203Q969S6 136 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 SLC25A46Q96AG3 418 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 DACT3Q96B18 629 aaPredicted RBP6.6□□□□□ -1.35
PNKP-229ENST00000637897 HAVCR1Q96D42 359 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 CMBLQ96DG6 245 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 C4orf36Q96KX1 117 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 TBX5Q99593 518 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 RNF167Q9H6Y7 350 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 ISG20L2Q9H9L3 353 aaKnown RBP6.6□□□□□ -1.35
PNKP-229ENST00000637897 SAP30LQ9HAJ7 183 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 ESM1Q9NQ30 184 aa6.6□□□□□ -1.35
PNKP-229ENST00000637897 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
PNKP-229ENST00000637897 F5H0A9 414 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 LOC110117498-PIK3R3F6TDL0 507 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 J3QLW9 94 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 J3QRK9 145 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 GABRPO00591 440 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 PHYHO14832 338 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 OGG1O15527 345 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 SGCEO43556 437 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 KHDRBS3O75525 346 aaKnown RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 FCN3O75636 299 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CDRT1O95170 752 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 SERPINA3P01011 423 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CD1AP06126 327 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 ERCC1P07992 297 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 ZNF19P17023 458 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CFL1P23528 166 aaKnown RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 ETV6P41212 452 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 RPS27P42677 84 aaKnown RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 HTR5AP47898 357 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 LSM6P62312 80 aaKnown RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 RGS21Q2M5E4 152 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CDONQ4KMG0 1287 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 KLF17Q5JT82 389 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 SPANXN2Q5MJ10 180 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 FAM201AQ5SY85 155 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 LINC01590Q5TEZ4 76 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 SLC18B1Q6NT16 456 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 PLEKHG7Q6ZR37 379 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 GLCCI1Q86VQ1 547 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 MS4A15Q8N5U1 240 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 RFLNBQ8N5W9 214 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 ZNF283Q8N7M2 679 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 ZFP41Q8N8Y5 198 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 MINDY2Q8NBR6 621 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 DEFB108BQ8NET1 73 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 OR1F12Q8NHA8 337 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 ITLN1Q8WWA0 313 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 DVL3Q92997 716 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 MAP6Q96JE9 813 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CEP19Q96LK0 163 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 C1orf147Q96MC9 270 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 TMED9Q9BVK6 235 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 METTL17Q9H7H0 456 aaPredicted RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 WDR76Q9H967 626 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 SMURF1Q9HCE7 757 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 RPRD1BQ9NQG5 326 aaKnown RBP6.59□□□□□ -1.35
PNKP-229ENST00000637897 SNTG1Q9NSN8 517 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 GRIP1Q9Y3R0 1128 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 TMEM14AQ9Y6G1 99 aa6.59□□□□□ -1.35
PNKP-229ENST00000637897 CMYA5Q8N3K9 4069 aa6.59□□□□□ -1.36
PNKP-229ENST00000637897 IGHV3-64DA0A0J9YX35 117 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ISPDA4D126 451 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 SELENOFO60613 162 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ZNF205O95201 554 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ABHD16AO95870 558 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ACSM4P0C7M7 580 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 CRABP1P29762 137 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 GCH1P30793 250 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 PYCR1P32322 319 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 SDC2P34741 201 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 NAA10P41227 235 aaPredicted RBP6.58□□□□□ -1.36
PNKP-229ENST00000637897 TGM4P49221 684 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 MTNR1BP49286 362 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 OR12D2P58182 307 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 PCBD1P61457 104 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 SCRN3Q0VDG4 424 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 MAB21L1Q13394 359 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ZMYND11Q15326 602 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 ZNF181Q2M3W8 571 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 DMKNQ6E0U4 476 aaPredicted RBP6.58□□□□□ -1.36
PNKP-229ENST00000637897 OR2T2Q6IF00 324 aa6.58□□□□□ -1.36
PNKP-229ENST00000637897 FAHD2BQ6P2I3 314 aaPredicted RBP6.58□□□□□ -1.36
PNKP-229ENST00000637897 RPL22L1Q6P5R6 122 aaKnown RBP6.58□□□□□ -1.36
PNKP-229ENST00000637897 DNM1P34Q6PK57 102 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms