RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ONECUT1Q9UBC0 465 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 PRPF19Q9UMS4 504 aaKnown RBP15.19■□□□□ 0.02
CLN6-220ENST00000637450 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 MPC1Q9Y5U8 109 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 TGP01266 2768 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 WNK1Q9H4A3 2382 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 ANXA2P2A6NMY6 339 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 H3BN98 237 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 RAP2AP10114 183 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 ACKR3P25106 362 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 IKZF1Q13422 519 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 FAM76BQ5HYJ3 339 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 STUMQ69YW2 141 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.18■□□□□ 0.02
CLN6-220ENST00000637450 CMTM4Q8IZR5 234 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 FTMTQ8N4E7 242 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 OR5T2Q8NGG2 359 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 OR10Z1Q8NGY1 313 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 OTOSQ8NHW6 89 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 GIPC3Q8TF64 312 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 OR5P3Q8WZ94 311 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 CCT8L2Q96SF2 557 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 DCTN5Q9BTE1 182 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 RTL8AQ9BWD3 113 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 DNTTIP1Q9H147 329 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 DPAGT1Q9H3H5 408 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 FAM96BQ9Y3D0 163 aa15.18■□□□□ 0.02
CLN6-220ENST00000637450 NOTCH1P46531 2555 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 ARRDC5A6NEK1 342 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 ZNF850A8MQ14 1090 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 CLPXO76031 633 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 CST4P01036 141 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 LYNP07948 512 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 PAICSP22234 425 aaKnown RBP15.17■□□□□ 0.02
CLN6-220ENST00000637450 PRDX4Q13162 271 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 MIDNQ504T8 468 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 LRRC10Q5BKY1 277 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 Q8N7P7 452 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 ZNF454Q8N9F8 522 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 ZSCAN4Q8NAM6 433 aaPredicted RBP15.17■□□□□ 0.02
CLN6-220ENST00000637450 C8orf46Q8TAG6 207 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 THEM6Q8WUY1 208 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 RPL3LQ92901 407 aaKnown RBP15.17■□□□□ 0.02
CLN6-220ENST00000637450 RAB3IPQ96QF0 476 aaPredicted RBP15.17■□□□□ 0.02
CLN6-220ENST00000637450 CHID1Q9BWS9 393 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 WDR13Q9H1Z4 485 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 ABCB9Q9NP78 766 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 SIRT7Q9NRC8 400 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 DNAJB11Q9UBS4 358 aa15.17■□□□□ 0.02
CLN6-220ENST00000637450 TMEM210A6NLX4 147 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 PRR23D1E9PI22 279 aaPredicted RBP15.16■□□□□ 0.02
CLN6-220ENST00000637450 M0QZ24 198 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 TIMM23O14925 209 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 CST1P01037 141 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 PRR23D2P0DMB1 279 aaPredicted RBP15.16■□□□□ 0.02
CLN6-220ENST00000637450 SELLP14151 372 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 POU1F1P28069 291 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 PROK1P58294 105 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 GMFBP60983 142 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 GINS1Q14691 196 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 TAF9Q16594 264 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 ASPHD2Q6ICH7 369 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 PLBD1Q6P4A8 553 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 GDPGP1Q6ZNW5 385 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 ZNF788Q6ZQV5 615 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 C1orf122Q6ZSJ8 110 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 TMEM179BQ7Z7N9 219 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 LRTOMTQ8WZ04 291 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 ASB9Q96DX5 294 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 RNF170Q96K19 258 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 LYZL4Q96KX0 146 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 PKP2Q99959 881 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 FGF23Q9GZV9 251 aaPredicted RBP15.16■□□□□ 0.02
CLN6-220ENST00000637450 SEMA6AQ9H2E6 1030 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 SNTG1Q9NSN8 517 aa15.16■□□□□ 0.02
CLN6-220ENST00000637450 CAB39Q9Y376 341 aaPredicted RBP15.16■□□□□ 0.02
CLN6-220ENST00000637450 PRKDCP78527 4128 aaKnown RBP15.15■□□□□ 0.02
CLN6-220ENST00000637450 RNASEK-C17orf49H0YIS7 233 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 SELENOFO60613 162 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 FBP1P09467 338 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 GUCA2AQ02747 115 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 Q6ZSV7 163 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 KRT74Q7RTS7 529 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 ANGPTL6Q8NI99 470 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 HPSE2Q8WWQ2 592 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 PIGCQ92535 297 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 TNFRSF14Q92956 283 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 MED30Q96HR3 178 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 LRGUKQ96M69 825 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 GAFA1Q96PS6 74 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 C16orf95Q9H693 158 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 ZNRD1Q9P1U0 126 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 ZNF391Q9UJN7 358 aa15.15■□□□□ 0.02
CLN6-220ENST00000637450 PRODHO43272 600 aa15.14■□□□□ 0.01
CLN6-220ENST00000637450 AKR7A2O43488 359 aa15.14■□□□□ 0.01
CLN6-220ENST00000637450 HMGN1P05114 100 aa15.14■□□□□ 0.01
CLN6-220ENST00000637450 ACAA1P09110 424 aaPredicted RBP15.14■□□□□ 0.01
CLN6-220ENST00000637450 T-ENOLP0DO92 83 aa15.14■□□□□ 0.01
CLN6-220ENST00000637450 CALB2P22676 271 aa15.14■□□□□ 0.01
CLN6-220ENST00000637450 EEF1B2P24534 225 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms