RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ANKRD53Q8N9V6 530 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 BAHD1Q8TBE0 780 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 LHX4Q969G2 390 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 UBQLN3Q9H347 655 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 SIRT5Q9NXA8 310 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 C5orf52A6NGY3 159 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 PSMB1P20618 241 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 CNN1P51911 297 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 FGF8P55075 233 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 SHBQ15464 509 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 UBL3O95164 117 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 LSM11P83369 360 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 PAX5Q02548 391 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 BHLHA15Q7RTS1 189 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 COMMD1Q8N668 190 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 NTN4Q9HB63 628 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 AKR7A2O43488 359 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 MT-ATP6P00846 226 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 CTSLP07711 333 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 ANKRD34CP0C6C1 535 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 AREGP15514 252 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 PGFP49763 221 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 BCL7CQ8WUZ0 217 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 PELI1Q96FA3 418 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF385DQ9H6B1 395 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 A0A1W2PPC4 97 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 PATE3B3GLJ2 98 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 ALG1L2C9J202 215 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 TMPRSS11DO60235 418 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 SULT1A2P50226 295 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR5A2Q8NGI9 324 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 A0A1W2PPE3 182 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 CR2P20023 1033 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 ACHEP22303 614 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 C21orf58P58505 322 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 RPUSD3Q6P087 351 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR8B3Q8NGG8 313 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 SEH1LQ96EE3 360 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR8B2Q96RD0 313 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 HMGN4O00479 90 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 TNFRSF1AP19438 455 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 HYAL1Q12794 435 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 RRN3P1Q2M238 152 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR52N4Q8NGI2 321 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR5D13Q8NGL4 314 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 MYO18AQ92614 2054 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 FFAR4Q5NUL3 377 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 CHCHD4Q8N4Q1 142 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 NKAIN3Q8N8D7 197 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 TIMP4Q99727 224 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 OR2D2Q9H210 308 aa16.04■□□□□ 0.16
CACNA1A-227ENST00000636549 PCK2Q16822 640 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 CDH26Q8IXH8 852 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 C11orf54Q9H0W9 315 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 KCNMB2Q9Y691 235 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 LOC389332A0A1B0GUA5 103 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 RFPL4AA6NLU0 287 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 RFPL4AL1F8VTS6 287 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 CAMPP49913 170 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 FZD5Q13467 585 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 OR4S1Q8NGB4 309 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 OR10Z1Q8NGY1 313 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 RND1Q92730 232 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 CEPT1Q9Y6K0 416 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 GALNSP34059 522 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 OR2L13Q8N349 312 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 RELL2Q8NC24 303 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 C20orf27Q9GZN8 174 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 HILPDAQ9Y5L2 63 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 EML2O95834 649 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 PRF1P14222 555 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 SPI1P17947 270 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 SDHAP31040 664 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 DIO1P49895 249 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 TMEM108Q6UXF1 575 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 MFSD4AQ8N468 514 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 P2RX4Q99571 388 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 ANKRD60Q9BZ19 345 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 LSM2Q9Y333 95 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 DSCR4P56555 118 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 DGCR2P98153 550 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 OR5R1Q8NH85 324 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 ADAMTS5Q9UNA0 930 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 RICTORQ6R327 1708 aa16.03■□□□□ 0.16
CACNA1A-227ENST00000636549 ANKUB1A6NFN9 424 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 ORM1P02763 201 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 RAB5AP20339 215 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 TMED6Q8WW62 240 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 SLC35B4Q969S0 331 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 FOXB1Q99853 325 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 CD22P20273 847 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 CAPZBP47756 277 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 KLF3P57682 345 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 FMODQ06828 376 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF774Q6NX45 483 aa16.02■□□□□ 0.16
CACNA1A-227ENST00000636549 CT55Q8WUE5 264 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms