RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DUXBA0A1W2PPF3 345 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 RAB27BO00194 218 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 IFNA2P01563 188 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 FUT3P21217 361 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SNRPNP63162 240 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OR1C1Q15619 314 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CEACAM16Q2WEN9 425 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 REEP6Q96HR9 211 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 C2orf50Q96LR7 162 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 AMELYQ99218 206 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PRDM14Q9GZV8 571 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 IL36GQ9NZH8 169 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DVL2O14641 736 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TERTO14746 1132 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 RAB5CP51148 216 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 HMGN3Q15651 99 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 MTFR2Q6P444 385 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 YRDCQ86U90 279 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 WDSUB1Q8N9V3 476 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 NMES1Q9C002 83 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 FLVCR1Q9Y5Y0 555 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 B3GALT1Q9Y5Z6 326 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 LHFPL6Q9Y693 200 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 EEF1E1-BLOC1S5C9J1V9 151 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 AGRPO00253 132 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 BCL2L11O43521 198 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 LANCL1O43813 399 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 JTBO76095 146 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CCL3P10147 92 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CCL4P13236 92 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 NAAAQ02083 359 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 HIST3H3Q16695 136 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 C6orf183Q5T699 404 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ATPAF1Q5TC12 328 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TFAP2EQ6VUC0 442 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 BMPERQ8N8U9 685 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ARRDC1-AS1Q9H2J1 176 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 hCG_1807616A0A1W2PRN6 198 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CLN3Q13286 438 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ABLIM2Q6H8Q1 611 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM200AQ86VY9 491 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 LSRQ86X29 649 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 COMMD1Q8N668 190 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OR10AC1Q8NH08 325 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DCUN1D4Q92564 292 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 NINJ1Q92982 152 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DNAJA3Q96EY1 480 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SLCO1B1Q9Y6L6 691 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 KIAA1549LQ6ZVL6 1849 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 A0A0J9YW62 118 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OR5H15A6NDH6 313 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 M0QYG6 137 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 LRP3O75074 770 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DHRS2Q13268 280 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DCAF10Q5QP82 559 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SLC25A24Q6NUK1 477 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PPP1R32Q7Z5V6 425 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OR5T2Q8NGG2 359 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CRLF2Q9HC73 371 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TAS2R3Q9NYW6 316 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 H3BSH0 61 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HPNP05981 417 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 IL32P24001 234 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HOXD11P31277 338 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 STPG2Q8N412 459 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ZBTB44Q8NCP5 570 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PBDC1Q9BVG4 233 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ST6GALNAC5Q9BVH7 336 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 UBE2J1Q9Y385 318 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 RHBDD3Q9Y3P4 386 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 A0A1B0GTH9 108 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR5H14A6NHG9 310 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PDCD6O75340 191 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR5H8P0DN80 308 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SRSF5Q13243 272 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 EXOSC2Q13868 293 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PAN3Q58A45 887 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR52N4Q8NGI2 321 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR14K1Q8NGZ2 314 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 RBPMSQ93062 196 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ORAI1Q96D31 301 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TM2D1Q9BX74 207 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 LPAR5Q9H1C0 372 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PRO3102Q9H379 93 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GPR35Q9HC97 309 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TNFSF11O14788 317 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 CYTIPO60759 359 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 KLF7O75840 302 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 NAT1P18440 290 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PTGER4P35408 488 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MUC20Q8N307 709 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ZNRF4Q8WWF5 429 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PIGCQ92535 297 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 NTNG2Q96CW9 530 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 NARS2Q96I59 477 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 KIRREL1Q96J84 757 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms