RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 OR13C9Q8NGT0 318 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 OR2AJ1Q8NGZ0 328 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 OR6X1Q8NH79 312 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 FAM71F1Q96KD3 344 aaPredicted RBP6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 TINAGL1Q9GZM7 467 aaPredicted RBP6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 CHST6Q9GZX3 395 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 WDR54Q9H977 334 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 WIF1Q9Y5W5 379 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 FREM3P0C091 2139 aa6.34□□□□□ -1.4
CTNNA1-244ENST00000627109 SVILO95425 2214 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 EREGO14944 169 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SYT7O43581 403 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 HLA-AP01891 365 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 HCKP08631 526 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 FGF2P09038 288 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CCL4P13236 92 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 POU3F2P20265 443 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 LAP3P28838 519 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLC6A9P48067 706 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ARHGDIBP52566 201 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 PRSS12P56730 875 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ARFRP1Q13795 201 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 FOXRED2Q8IWF2 684 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 RELL2Q8NC24 303 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 C11orf40Q8WZ69 217 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CMBLQ96DG6 245 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 COL6A6A6NMZ7 2263 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 EML6Q6ZMW3 1958 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 RNF222A6NCQ9 220 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 LMX1BO60663 402 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 TIAF1O95411 115 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CD34P28906 385 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 BDKRB2P30411 391 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ZNF41P51814 821 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 GK2Q14410 553 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CNN3Q15417 329 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 GLRX5Q86SX6 157 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ZNF546Q86UE3 836 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 PRR18Q8N4B5 295 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 C12orf45Q8N5I9 185 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 IL22RA1Q8N6P7 574 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 AGBL5Q8NDL9 886 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 STEAP2Q8NFT2 490 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 OR1J2Q8NGS2 313 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 RBPMSQ93062 196 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLAMF6Q96DU3 332 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 OR6C1Q96RD1 312 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CNTD2Q9H8S5 307 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 BARX1Q9HBU1 254 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 PPP4R1LQ9P1A2 415 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLC5A6Q9Y289 635 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 TRBV6-7A0A0A0MS04 114 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 A0A1B0GW55 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 KANTRA0A1W2PQU2 76 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 PROB1E7EW31 1015 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SSX5O60225 188 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L2P0CJ85 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L3P0CJ86 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L4P0CJ87 422 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L5P0CJ88 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L6P0CJ89 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4L7P0CJ90 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 LYL1P12980 280 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 BTF3P20290 206 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 BIDP55957 195 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CLRN1P58418 232 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 NKAIN1Q4KMZ8 207 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 C10orf128Q5T292 105 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ZNF660Q6AZW8 331 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 AWAT2Q6E213 333 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 GSG1LQ6UXU4 331 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 HSD17B13Q7Z5P4 300 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CPEB2Q7Z5Q1 589 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 OR5AS1Q8N127 324 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLC22A24Q8N4F4 322 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 FAM89BQ8N5H3 189 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 OR1M1Q8NGA1 313 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 OR5L2Q8NGL0 311 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLC25A43Q8WUT9 341 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 ADAT3Q96EY9 351 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 PBOV1Q9GZY1 135 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SDHAF3Q9NRP4 125 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 SLC39A1Q9NY26 324 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 MYOTQ9UBF9 498 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 DUX4Q9UBX2 424 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 MSRB2Q9Y3D2 182 aa6.33□□□□□ -1.4
CTNNA1-244ENST00000627109 TRBV11-1A0A0K0K1C0 115 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 A4D1N5 150 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 DISC1C4P0D8 188 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 MPIG6BO95866 241 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 FGF5P12034 268 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 CEACAM1P13688 526 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 OTX1P32242 354 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 KRTAP27-1Q3LI81 207 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 FAM74A1Q5RGS3 127 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 C3orf33Q6P1S2 294 aa6.32□□□□□ -1.4
CTNNA1-244ENST00000627109 TRAT1Q6PIZ9 186 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms