RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	DVL3	Q92997	716 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	SPSB4	Q96A44	273 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	SGK3	Q96BR1	496 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	PELI1	Q96FA3	418 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF799	Q96GE5	643 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	JMJD8	Q96S16	334 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	DCLRE1C	Q96SD1	692 aa	Known RBP	4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	KCNJ15	Q99712	375 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	COPS4	Q9BT78	406 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	WAC	Q9BTA9	647 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	JAM3	Q9BX67	310 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	CYSLTR2	Q9NS75	346 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	CENPM	Q9NSP4	180 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	PLCXD1	Q9NUJ7	323 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	AP5S1	Q9NUS5	200 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	ERVK13-1	Q9NX77	482 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	NKIRAS2	Q9NYR9	191 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	PSORS1C1	Q9UIG5	152 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	SLC22A13	Q9Y226	551 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	LSM2	Q9Y333	95 aa	Known RBP	4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	WIPI2	Q9Y4P8	454 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	ORC6	Q9Y5N6	252 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	CACNG2	Q9Y698	323 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	DSCAML1	Q8TD84	2053 aa		4.95	□□□□□ -1.62
LINC00963-215	ENST00000622972	CUBN	O60494	3623 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972		H3BSH0	61 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGHV1-46	P01743	117 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGHV3-13	P01766	116 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	MT-ND2	P03891	347 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR2T7	P0C7T2	308 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ADRA2C	P18825	462 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	CRHBP	P24387	322 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	FPR2	P25090	351 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	LIPA	P38571	399 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	BLVRA	P53004	296 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	LMO4	P61968	165 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	SLC35A2	P78381	396 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	LCN2	P80188	198 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	TNFAIP6	P98066	277 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAM3A	P98173	230 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	TMED1	Q13445	227 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	DMRTC1	Q5HYR2	192 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	WDR38	Q5JTN6	314 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAM209A	Q5JX71	171 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	C6orf141	Q5SZD1	244 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	LCN1P1	Q5VSP4	162 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	MEDAG	Q5VYS4	303 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	MBNL2	Q5VZF2	373 aa	Known RBP	4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR2T2	Q6IF00	324 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	FBXW12	Q6X9E4	464 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	RBMS3	Q6XE24	437 aa	Known RBP	4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	AHSA2	Q719I0	299 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	FAM57B	Q71RH2	274 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	CATSPERD	Q86XM0	798 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	C1orf174	Q8IYL3	243 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF679	Q8IYX0	411 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	C3orf56	Q8N813	242 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZFP41	Q8N8Y5	198 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR51A4	Q8NGJ6	313 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR2AJ1	Q8NGZ0	328 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR2T27	Q8NH04	317 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	CMBL	Q96DG6	245 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	CNBD2	Q96M20	576 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR5M11	Q96RB7	305 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	DIRC2	Q96SL1	478 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF184	Q99676	751 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	SUCNR1	Q9BXA5	334 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	PRRG3	Q9BZD7	231 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	DUSP21	Q9H596	190 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	MSL2	Q9HCI7	577 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	TBCCD1	Q9NVR7	557 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ERVK-18	Q9QC07	812 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	LAMP5	Q9UJQ1	280 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZDHHC8	Q9ULC8	765 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.94	□□□□□ -1.62	4e-6	■■■□□ 17.2
LINC00963-215	ENST00000622972	HSPE1-MOB4	S4R3N1	261 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	COL6A5	A8TX70	2615 aa		4.94	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGHV3-64D	A0A0J9YX35	117 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	TMEM82	A0PJX8	343 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	OR4C45	A6NMZ5	311 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	ZNF670-ZNF695	F2Z2N8	137 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972		J3QLI3	93 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	P2RY10	O00398	339 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	DENR	O43583	198 aa	Known RBP	4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	FOXH1	O75593	365 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	RPP14	O95059	124 aa	Known RBP	4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	IGHV2-5	P01817	119 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	LCAT	P04180	440 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	HLA-DPB1	P04440	258 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	CDK1	P06493	297 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	H2BFM	P0C1H6	154 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	PIP	P12273	146 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	TNFRSF1A	P19438	455 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	KITLG	P21583	273 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	CFP	P27918	469 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	PMEL	P40967	661 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	MAP2K4	P45985	399 aa		4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	RPS11	P62280	158 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
LINC00963-215	ENST00000622972	ST3GAL4	Q11206	333 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms