RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MYCBPQ99417 103 aaPredicted RBP11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 TMEM246Q9BRR3 403 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 TMEM165Q9HC07 324 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 AMBNQ9NP70 447 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 G6PC2Q9NQR9 355 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 ACOXLQ9NUZ1 547 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 MIOXQ9UGB7 285 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 ENPP5Q9UJA9 477 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 SLC22A13Q9Y226 551 aa11.72□□□□□ -0.53
PCDHGC3-208ENST00000622836 A0A1B0GVI7 797 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 TMEM210A6NLX4 147 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 H3BSH0 61 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 LGALS8O00214 317 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 CDIPTO14735 213 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 FADS2O95864 444 aaKnown RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 FAHP16930 419 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 GABRB1P18505 474 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 PSMB10P40306 273 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 SEC61A1P61619 476 aaKnown RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 GNB2P62879 340 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 CSNK2BP67870 215 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 ZNF154Q13106 437 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 TTC23Q5W5X9 447 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 PLCXD3Q63HM9 321 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 MOB3CQ70IA8 216 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 WDR86Q86TI4 376 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 PRIMA1Q86XR5 153 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 ACBD7Q8N6N7 88 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 OR5P3Q8WZ94 311 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 LGALS12Q96DT0 336 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 VCXQ9H320 206 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 METTL17Q9H7H0 456 aaPredicted RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 PLEKHA1Q9HB21 404 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 TRIM36Q9NQ86 728 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 RPL36Q9Y3U8 105 aaKnown RBP11.71□□□□□ -0.53
PCDHGC3-208ENST00000622836 WNK2Q9Y3S1 2297 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 TRAV38-1A0A0B4J264 116 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 OOEPA6NGQ2 149 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 SYT7O43581 403 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 CLIC3O95833 236 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 NRASP01111 189 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 WNT2P09544 360 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 GATA3P23771 443 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ZFP36P26651 326 aaKnown RBP11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 THBS2P35442 1172 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 GPM6AP51674 278 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ACTA2P62736 377 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ACTG2P63267 376 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ZNF684Q5T5D7 378 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ZBTB37Q5TC79 503 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 DCDC5Q6ZRR9 648 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 DOK3Q7L591 496 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 KCTD20Q7Z5Y7 419 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 CATSPERDQ86XM0 798 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 DHRSXQ8N5I4 330 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 SETD9Q8NE22 299 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 RORBQ92753 470 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 RNPEPL1Q9HAU8 725 aa11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 EXOGQ9Y2C4 368 aaKnown RBP11.7□□□□□ -0.54
PCDHGC3-208ENST00000622836 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 J3QLW9 94 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 DLGAP1O14490 977 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 FSTL3O95633 263 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 HTR1AP08908 422 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 ZNF19P17023 458 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 CPT2P23786 658 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 PITPNBP48739 271 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 GMFBP60983 142 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 GNG3P63215 75 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 RAB40BQ12829 278 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 CEACAM21Q3KPI0 293 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 KRTAP21-3Q3LHN1 58 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 CDONQ4KMG0 1287 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 KLHL22Q53GT1 634 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 DMRTC1Q5HYR2 192 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 LHFPL3Q86UP9 236 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 GCSAMQ8N6F7 178 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 HPSE2Q8WWQ2 592 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 RPL3LQ92901 407 aaKnown RBP11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 C4orf36Q96KX1 117 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 ALG8Q9BVK2 526 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 C7orf69Q9H7B7 122 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 CLN8Q9UBY8 286 aa11.69□□□□□ -0.54
PCDHGC3-208ENST00000622836 IGHV3OR15-7A0A075B7D8 119 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms