RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
MSH6-215ENST00000622629 PCED1AQ9H1Q7 454 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 MRPL22Q9NWU5 206 aaKnown RBP11.41□□□□□ -0.58
MSH6-215ENST00000622629 HMSDA8MTL9 139 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 XRCC2O43543 280 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 TSPAN2O60636 221 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
MSH6-215ENST00000622629 TXNDC12O95881 172 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 PTGFRP43088 359 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 PLXDC2Q6UX71 529 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 C6orf201Q7Z4U5 140 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 OR14J1Q9UGF5 321 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 CACNA1DQ01668 2161 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 TUBAL3A6NHL2 446 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 CD1AP06126 327 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 FCGR2CP31995 323 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 RPS11P62280 158 aaKnown RBP eCLIP11.41□□□□□ -0.58
MSH6-215ENST00000622629 TMEM255AQ5JRV8 349 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 SLC25A26Q70HW3 274 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 ZNF709Q8N972 641 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 OR5M8Q8NGP6 311 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
MSH6-215ENST00000622629 NUBPLQ8TB37 319 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 ADIPOR1Q96A54 375 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 NMNAT2Q9BZQ4 307 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 C12orf49Q9H741 205 aa11.41□□□□□ -0.58
MSH6-215ENST00000622629 PUS1Q9Y606 427 aaKnown RBP eCLIP11.41□□□□□ -0.58
MSH6-215ENST00000622629 A0A1W2PPC1 479 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 VSIG8P0DPA2 414 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 CNR1P21554 472 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 WIPI1Q5MNZ9 446 aaPredicted RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 FAM122BQ7Z309 247 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 LGI3Q8N145 548 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 ZDHHC22Q8N966 263 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 CNEP1R1Q8N9A8 125 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 OR6K3Q8NGY3 331 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 KCNIP1Q9NZI2 227 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 PCDHB10Q9UN67 800 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 ZNF814B7Z6K7 855 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 CBR3O75828 277 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 MPC2O95563 127 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 MMP16P51512 607 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 PIGPP57054 158 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 MOGAT2Q3SYC2 334 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 TMPRSS13Q9BYE2 586 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 OCIAD1Q9NX40 245 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 LRFN1Q9P244 771 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 ST3GAL6Q9Y274 331 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 SNRNP200O75643 2136 aaKnown RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 ZNF587BE7ETH6 402 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 FBXL14Q8N1E6 418 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 RNF133Q8WVZ7 376 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 RTN4IP1Q8WWV3 396 aaPredicted RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 ZNF501Q96CX3 271 aaPredicted RBP11.4□□□□□ -0.58
MSH6-215ENST00000622629 C2orf50Q96LR7 162 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 SOSTQ9BQB4 213 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 NELFAQ9H3P2 528 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 TIMM10BQ9Y5J6 103 aa11.4□□□□□ -0.58
MSH6-215ENST00000622629 AQP8O94778 261 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 LYPD3O95274 346 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 EPHA8P29322 1005 aaPredicted RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 CLDN15P56746 228 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 MPPED2Q15777 294 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 PP6455Q8WZ26 134 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 UCK1Q9HA47 277 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 CD300LBA8K4G0 201 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 H3BUI4 141 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 CD63P08962 238 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 DUSP1P28562 367 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 MS4A7Q9GZW8 240 aaPredicted RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 PRMT8Q9NR22 394 aaPredicted RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 ICE1Q9Y2F5 2266 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 A0A1W2PP11 408 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 OR2M5A3KFT3 312 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 ST8SIA3O43173 380 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 NME2P1O60361 137 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 CDC14BO60729 498 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 ZNF205O95201 554 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 CARFQ8N187 725 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 OR5T1Q8NG75 326 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 OR51H1Q8NH63 302 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 RDH5Q92781 318 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 WASF3Q9UPY6 502 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 LRP3O75074 770 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 TTRP02766 147 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms