RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CCRL2O00421 344 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 KPNA3O00505 521 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CCL21O00585 134 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CDIPTO14735 213 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 BIRC5O15392 142 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SYNGR1O43759 233 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SSNA1O43805 119 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 MPZL2O60487 215 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 EEDO75530 441 aaKnown RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 DCTN3O75935 186 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CLIC3O95833 236 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 LGALS2P05162 132 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 BCHEP06276 602 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 GUSBP08236 651 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SLC2A1P11166 492 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PPOXP50336 477 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PRKXP51817 358 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 POU6F1Q14863 301 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DS1Q14954 304 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SPA17Q15506 151 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PRR4Q16378 134 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TRIM16LQ309B1 348 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TTLL9Q3SXZ7 439 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SPIN4Q56A73 249 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 BRMS1LQ5PSV4 323 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM42Q69YG0 159 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 UFSP1Q6NVU6 142 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 MED27Q6P2C8 311 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 FAM131AQ6UXB0 335 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TFAP2EQ6VUC0 442 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 FAM92BQ6ZTR7 304 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 MBOAT2Q6ZWT7 520 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 RALGPS2Q86X27 583 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 MKXQ8IYA7 352 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 VKORC1L1Q8N0U8 176 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 LGI3Q8N145 548 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PDIK1LQ8N165 341 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CA13Q8N1Q1 262 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 BPIFB2Q8N4F0 458 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 RNF175Q8N4F7 328 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PRELID2Q8N945 189 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 DUSP18Q8NEJ0 188 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 OR11L1Q8NGX0 322 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 OR10J5Q8NHC4 309 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 SLC7A13Q8TCU3 470 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CASTOR1Q8WTX7 329 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PYROXD1Q8WU10 500 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 DNAJA3Q96EY1 480 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 KCTD7Q96MP8 289 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TSNAXQ99598 290 aaKnown RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 FAM107BQ9H098 131 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 NAT10Q9H0A0 1025 aaKnown RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM38AQ9H6F2 299 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CWH43Q9H720 699 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 RDH14Q9HBH5 336 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 MYOZ1Q9NP98 299 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 FBXO6Q9NRD1 293 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 ENOPH1Q9UHY7 261 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 PCF11O94913 1555 aaKnown RBP2.73□□□□□ -1.97
BRCA1-229ENST00000621897 NUP155O75694 1391 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 ARHGAP21Q5T5U3 1957 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 WDR7Q9Y4E6 1490 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 A0A1W2PRG6 482 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 GJE1A6NN92 205 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 LAD1O00515 517 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 KLRC4O43908 158 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 PRKYO43930 277 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 SLC16A7O60669 478 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 SMIM24O75264 130 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 AQP8O94778 261 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 SNAP29O95721 258 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 IGHV2-5P01817 119 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 NBEAP1P0C6P0 100 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 LIMS3P0CW19 117 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 LIMS4P0CW20 117 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CT45A6P0DMU7 189 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CT45A5P0DMU8 189 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CT45A7P0DMV0 189 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 HIST1H1EP10412 219 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CRABP1P29762 137 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 HTR1FP30939 366 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TAS2R31P59538 309 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 RND3P61587 244 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 STXBP1P61764 594 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 RPL8P62917 257 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 RPL19P84098 196 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ACVR1Q04771 509 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CD164Q04900 197 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ST3GAL4Q11206 333 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 IL18R1Q13478 541 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 GGTLC2Q14390 218 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 PSMD5Q16401 504 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TBC1D28Q2M2D7 210 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CT45A1Q5HYN5 189 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 OR10J3Q5JRS4 329 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 VAX1Q5SQQ9 334 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TRIQKQ629K1 86 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 PVRIGQ6DKI7 326 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms