RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-225	ENST00000621715	HABP2	Q14520	560 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	TAF13	Q15543	124 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	TIGD6	Q17RP2	521 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	GFOD2	Q3B7J2	385 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	LRRC10	Q5BKY1	277 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715		Q6ZTK2	550 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	LINC00471	Q8N535	108 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	PIFO	Q8TCI5	191 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	HPSE2	Q8WWQ2	592 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	DUS3L	Q96G46	650 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	DMRTB1	Q96MA1	342 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	PAPOLG	Q9BWT3	736 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	MAB21L2	Q9Y586	359 aa		13.61	□□□□□ -0.23
TARDBP-225	ENST00000621715	RHBDL1	O75783	438 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	DCTD	P32321	178 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	ERVFRD-1	P60508	538 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	PPP1R8	Q12972	351 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	TEX30	Q5JUR7	227 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	OR4C15	Q8NGM1	316 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	LYZL4	Q96KX0	146 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	METTL8	Q9H825	291 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	SP140L	Q9H930	580 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	MED20	Q9H944	212 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	SPAG4	Q9NPE6	437 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	BRD7	Q9NPI1	651 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	IL20	Q9NYY1	176 aa		13.6	□□□□□ -0.23
TARDBP-225	ENST00000621715	IGKV1D-17	A0A075B6S4	117 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ZNF850	A8MQ14	1090 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ADARB2-AS1	A8MUL3	147 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715		M0R1W7	72 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	SIGLEC5	O15389	551 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	GAST	P01350	101 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	FMO3	P31513	532 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	SMIM11A	P58511	58 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ACSM1	Q08AH1	577 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	PRDX4	Q13162	271 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	EIF2B1	Q14232	305 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	DMRTC1	Q5HYR2	192 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ZNRF1	Q8ND25	227 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	OR6K6	Q8NGW6	343 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	RNF133	Q8WVZ7	376 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	OR5P3	Q8WZ94	311 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ABHD6	Q9BV23	337 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	MYLK2	Q9H1R3	596 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	CCDC134	Q9H6E4	229 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	IL1RAP	Q9NPH3	570 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	CD300A	Q9UGN4	299 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	ZNF222	Q9UK12	451 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715	LYVE1	Q9Y5Y7	322 aa		13.59	□□□□□ -0.23
TARDBP-225	ENST00000621715		A0A1W2PQ09	198 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	TIPRL	O75663	272 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	SOX14	O95416	240 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	FABP3	P05413	133 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	ACAA1	P09110	424 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	VSIG10L2	P0DP72	767 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	CD28	P10747	220 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	NDUFB7	P17568	137 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	OPRL1	P41146	370 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	NAA10	P41227	235 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	SLC25A1	P53007	311 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	GRB2	P62993	217 aa	Known RBP	13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	FAM76B	Q5HYJ3	339 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	NCR3LG1	Q68D85	454 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	MKX	Q8IYA7	352 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	DYNAP	Q8N1N2	210 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	C11orf42	Q8N5U0	333 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	OR52L1	Q8NGH7	329 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	MRAP	Q8TCY5	172 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	DNTTIP1	Q9H147	329 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	MMP28	Q9H239	520 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	C19orf12	Q9NSK7	152 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	SERTAD4	Q9NUC0	356 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	ARMC1	Q9NVT9	282 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	VNN3	Q9NY84	501 aa		13.58	□□□□□ -0.24
TARDBP-225	ENST00000621715	FAM183A	A6NL82	134 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	NDUFAB1	O14561	156 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	ARPC2	O15144	300 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	ANGPTL7	O43827	346 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	CCDC22	O60826	627 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	IFNGR2	P38484	337 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	BMX	P51813	675 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	HMGA2	P52926	109 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	CAV3	P56539	151 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	LRRC75B	Q2VPJ9	315 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	NSUN5P1	Q3KNT7	163 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	OR51G2	Q8NGK0	314 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	OR4C13	Q8NGP0	309 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	OR10Z1	Q8NGY1	313 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	WIPF2	Q8TF74	440 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	MICU1	Q9BPX6	476 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	TSSK6	Q9BXA6	273 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	MEGF9	Q9H1U4	602 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	ZNF702P	Q9H963	129 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	TBC1D23	Q9NUY8	699 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	TAS2R1	Q9NYW7	299 aa		13.57	□□□□□ -0.24
TARDBP-225	ENST00000621715	NLK	Q9UBE8	527 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms