RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF684Q5T5D7 378 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 LINC00114Q6XXX2 140 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 ATG4DQ86TL0 474 aaPredicted RBP6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 MARCH3Q86UD3 253 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 PNLDC1Q8NA58 520 aaKnown RBP6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 PLPP5Q8NEB5 264 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 OR13C9Q8NGT0 318 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 OR52N5Q8NH56 324 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 RXFP4Q8TDU9 374 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 FGGYQ96C11 551 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 TLNRD1Q9H1K6 362 aa6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 C19orf25Q9UFG5 118 aaPredicted RBP6.21□□□□□ -1.42
SRGAP3-213ENST00000618999 BORCS7-ASMTA0A0B4J1R7 106 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TTLL8A6PVC2 850 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 FABP1P07148 127 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 MELTFP08582 738 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 HOXB5P09067 269 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 SFTA3P0C7M3 94 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 FGF5P12034 268 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 ZBTB25P24278 435 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 PTAFRP25105 342 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 NPBWR1P48145 328 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB1AP62820 205 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 NAAAQ02083 359 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 ZFP36L1Q07352 338 aaKnown RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 OR2AJ1Q8NGZ0 328 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 ASB5Q8WWX0 329 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 MESP1Q9BRJ9 268 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 WDR13Q9H1Z4 485 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 KLK13Q9UKR3 277 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 LRP12Q9Y561 859 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 B3GALT1Q9Y5Z6 326 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 KPTNQ9Y664 436 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 R4GMQ9 66 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 IGKV3D-11A0A0A0MRZ8 115 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 A0A1B0GTI1 187 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RNASEK-C17orf49H0YIS7 233 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 MT-ATP6P00846 226 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 KNG1P01042 644 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 IFI6P09912 130 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 ABOP16442 354 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 GNB3P16520 340 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CSNK2A1P68400 391 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TMEM128Q5BJH2 165 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 LCN10Q6JVE6 187 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CORO6Q6QEF8 472 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 DCXRQ7Z4W1 244 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 NAA40Q86UY6 237 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 GVQW1Q8N7I0 195 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CSNK2A3Q8NEV1 391 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 OR51A2Q8NGJ7 313 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 OR1N1Q8NGS0 311 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TAAR8Q969N4 342 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CMBLQ96DG6 245 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB3CQ96E17 227 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 AMELYQ99218 206 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 LPAR3Q9UBY5 353 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 GDF2Q9UK05 429 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RPH3AQ9Y2J0 694 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 COA3Q9Y2R0 106 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RALGAPA1Q6GYQ0 2036 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CUL9Q8IWT3 2517 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 A6NIZ1 184 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 K7EPK0 472 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TAAR5O14804 337 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 KCNAB3O43448 404 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 OR2T1O43869 369 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 SSX5O60225 188 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 DDAH2O95865 285 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TXNDC12O95881 172 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 SMIM6P0DI80 62 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB2AP61019 212 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RAP1BP61224 184 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RAP1AP62834 184 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CTAG1AP78358 180 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 FHL1Q13642 323 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CHRFAM7AQ494W8 412 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CBLN3Q6UW01 205 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 C16orf47Q6ZP98 133 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 LINC00346Q8IVM7 164 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 FAM71E2Q8N5Q1 922 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 CPT1CQ8TCG5 803 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 RPS4Y2Q8TD47 263 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 SEC61A2Q9H9S3 476 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 PADI1Q9ULC6 663 aa6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 ZFHX2Q9C0A1 2572 aaPredicted RBP6.2□□□□□ -1.42
SRGAP3-213ENST00000618999 TRBV11-1A0A0K0K1C0 115 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 OR6C76A6NM76 312 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 EIF4E2O60573 245 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 LRP3O75074 770 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CD74P04233 296 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CHRM2P08172 466 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 S100A2P29034 98 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CAMLGP49069 296 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 FIP1L1Q6UN15 594 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ANKRD37Q7Z713 158 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms