RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CEACAM16Q2WEN9 425 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 PDLIM3Q53GG5 364 aaPredicted RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 PLAC9Q5JTB6 97 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 MEDAGQ5VYS4 303 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 DEF8Q6ZN54 512 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 SHFQ7M4L6 423 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 TGIF2LXQ8IUE1 241 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 C1orf174Q8IYL3 243 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 FAM185AQ8N0U4 392 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 KDM8Q8N371 416 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 TMEM186Q96B77 213 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 BSCL2Q96G97 398 aaPredicted RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 ALKBH3Q96Q83 286 aaPredicted RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 INTS14Q96SY0 518 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 TEAD3Q99594 435 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 MCHR1Q99705 422 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 NXF2Q9GZY0 626 aaKnown RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 TMPRSS5Q9H3S3 457 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 MS4A5Q9H3V2 200 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 C1orf198Q9H425 327 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 SLC23A1Q9UHI7 598 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 ZDHHC8Q9ULC8 765 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 STARD10Q9Y365 291 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 PNMA8CA0A1B0GUJ8 204 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 TMEM129A0AVI4 362 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 H0YAE9 185 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 UBL3O95164 117 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 OR6A2O95222 327 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 PTHP01270 115 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 IL1AP01583 271 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HIST1H2ABP04908 130 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 CELA3BP08861 270 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 TSPAN19P0C672 248 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 ASAH2BP0C7U1 165 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 IFI30P13284 250 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 ANXA7P20073 488 aaKnown RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 EPHA1P21709 976 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 DTYMKP23919 212 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HSD11B1P28845 292 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 GLRXP35754 106 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 TGFBR2P37173 567 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 MAGEB1P43366 347 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 GZMMP51124 257 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SELENOVP59797 346 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 CXCR4P61073 352 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 RPS23P62266 143 aaKnown RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 RAP1AP62834 184 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 IL24Q13007 206 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 P2RY14Q15391 338 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 CNN3Q15417 329 aaKnown RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 ZNF74Q16587 644 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HIST3H3Q16695 136 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 GSG1Q2KHT4 349 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 PCGF3Q3KNV8 242 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 AWAT1Q58HT5 328 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 ENTPD8Q5MY95 495 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 FAHD2BQ6P2I3 314 aaPredicted RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 KCTD8Q6ZWB6 473 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HIST3H2AQ7L7L0 130 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SLC16A13Q7RTY0 426 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 MYPOPQ86VE0 399 aaPredicted RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 CALHM3Q86XJ0 350 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 KLBQ86Z14 1044 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 PRSS35Q8N3Z0 413 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 LRRC18Q8N456 261 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 OR6T1Q8NGN1 323 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 CLDND2Q8NHS1 167 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 DYNC2LI1Q8TCX1 351 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HIST1H2ACQ93077 130 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 TMEM54Q969K7 222 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 FOXRED1Q96CU9 486 aaPredicted RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 LRRC58Q96CX6 371 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 FAHD2AQ96GK7 314 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SLC25A44Q96H78 314 aaPredicted RBP7.32□□□□□ -1.24
GPC6-202ENST00000617456 ZNF75AQ96N20 296 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 CLUHP3Q96NS8 147 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SEPHS2Q99611 448 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 PRRT1Q99946 306 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 HEXA-AS1Q9H8Q6 139 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SPAG4Q9NPE6 437 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 SNTG1Q9NSN8 517 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 UBQLN2Q9UHD9 624 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 POFUT2Q9Y2G5 429 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 PEX16Q9Y5Y5 336 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 WNK2Q9Y3S1 2297 aa7.32□□□□□ -1.24
GPC6-202ENST00000617456 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 LOC105371242A0A075B767 164 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 IGHV2OR16-5A0A0B4J2B6 119 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 A0A0G2JND7 137 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 A0A1W2PPL8 197 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 PLSCR5A0PG75 271 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 BTBD17A6NE02 478 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 MCIDASD6RGH6 385 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 K7EP13 123 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 WNT9BO14905 357 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 GSTA4O15217 222 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms