RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 BANF2Q9H503 90 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 ZMAT3Q9HA38 289 aaKnown RBP8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 TP53TG5Q9Y2B4 290 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 ALG5Q9Y673 324 aa8.68□□□□□ -1.02
AL353770.3-201ENST00000616253 ATMQ13315 3056 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 TRAV6A0A075B6T7 132 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 A0A1W2PP11 408 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 WIPF3A6NGB9 483 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 K7ENP7 123 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 CRTAPO75718 401 aaPredicted RBP8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 LYZL6O75951 148 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 TCRBP04435 133 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 LPLP06858 475 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 APLNRP35414 380 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 VEGFCP49767 419 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 TGFBR3Q03167 851 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 FOXF2Q12947 444 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 TBR1Q16650 682 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 SLC22A6Q4U2R8 563 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 TMEM42Q69YG0 159 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 INO80CQ6PI98 192 aaPredicted RBP8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 C1QL2Q7Z5L3 287 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 CHST4Q8NCG5 386 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 APOBEC3DQ96AK3 386 aaPredicted RBP8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 SEH1LQ96EE3 360 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 NICN1Q9BSH3 213 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 MCUBQ9NWR8 336 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 COPZ2Q9P299 210 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 ELF5Q9UKW6 265 aaPredicted RBP8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 ING4Q9UNL4 249 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 PTPRQQ9UMZ3 2332 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
AL353770.3-201ENST00000616253 A0A0A6YYD4 124 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ZNF816-ZNF321PA0A0X1KG74 233 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 FAM230AA0A1W2PPH8 454 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 A0A1W2PR80 420 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SULT1C2O00338 296 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 RRP8O43159 456 aaKnown RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SCGNO76038 276 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 NRASP01111 189 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 FCER2P06734 321 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CSF1P09603 554 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 PRKACBP22694 351 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MTCP1P56278 107 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 GK2Q14410 553 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SFRP4Q6FHJ7 346 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 FAM180AQ6UWF9 173 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 Q6ZTK2 550 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SLC30A7Q8NEW0 376 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 AQP3Q92482 292 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 EXTL1Q92935 676 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CST11Q9H112 138 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 LPAR5Q9H1C0 372 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SCPEP1Q9HB40 452 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 BAHCC1Q9P281 2608 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 IGKV1-27A0A075B6S5 117 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MBD3L4A6NDZ8 208 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MBD3L3A6NE82 208 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MBD3L5A6NJ08 208 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CCNKO75909 580 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CNOT4O95628 575 aaKnown RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 NGFP01138 241 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 TPOP07202 933 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 NAT2P11245 290 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 GTF2F2P13984 249 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SERPINA2P20848 420 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 WNT5AP41221 380 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 PER3P56645 1201 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ACTBP60709 375 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ZP1P60852 638 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 UBE2NP61088 152 aaKnown RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 BTG1P62324 171 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ACTG1P63261 375 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SSBP1Q04837 148 aaKnown RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MALLQ13021 153 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 HLXQ14774 488 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 TSC22D1Q15714 1073 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ZNF260Q3ZCT1 412 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 PLCXD3Q63HM9 321 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 SEM1Q6ZVN7 128 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MRPL21Q7Z2W9 205 aaKnown RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 RTN4RL2Q86UN3 420 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 OR4C16Q8NGL9 310 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 OR10K1Q8NGX5 313 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 MBD3L2Q8NHZ7 208 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 PIGCQ92535 297 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 BORCS8Q96FH0 119 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 ZNF75AQ96N20 296 aa8.66□□□□□ -1.02
AL353770.3-201ENST00000616253 S100A13Q99584 98 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms