RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 UCK1Q9HA47 277 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 C19orf53Q9UNZ5 99 aaPredicted RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 ATG2BQ96BY7 2078 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 ETHE1O95571 254 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 HPP00738 406 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 SNRPCP09234 159 aaKnown RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 SUMO1P63165 101 aaKnown RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 FAM3AP98173 230 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 EVA1AQ9H8M9 152 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 RICTORQ6R327 1708 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 TRAV34A0A0B4J273 112 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 CHRM2P08172 466 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 GABRG2P18507 467 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 HMGN3Q15651 99 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 SIGLEC11Q96RL6 698 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 HOXC11O43248 304 aaPredicted RBP13.9□□□□□ -0.19
TNXB-209ENST00000613214 RPL12P30050 165 aaKnown RBP13.9□□□□□ -0.19
TNXB-209ENST00000613214 ECI1P42126 302 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 FA2HQ7L5A8 372 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 NOXO1Q8NFA2 376 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 OR2A1Q8NGT9 310 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 OR1L3Q8NH93 324 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 BCL2L2Q92843 193 aaPredicted RBP13.9□□□□□ -0.19
TNXB-209ENST00000613214 FOXB1Q99853 325 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 TMEM147Q9BVK8 224 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 S1PR5Q9H228 398 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.19
TNXB-209ENST00000613214 ALG1L2C9J202 215 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 UPK1AO00322 258 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 PPM1DO15297 605 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 NEURL1O76050 574 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 CPN1P15169 458 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 MGMTP16455 207 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 C1orf210Q8IVY1 113 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 MRGPRDQ8TDS7 321 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 R4GMQ9 66 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 HYAL1Q12794 435 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 ZNF141Q15928 474 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 RNF2Q99496 336 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 PSD2Q9BQI7 771 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 TCEAL7Q9BRU2 100 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 NKX6-2Q9C056 277 aaPredicted RBP13.89□□□□□ -0.19
TNXB-209ENST00000613214 RBFOX1Q9NWB1 397 aaKnown RBP13.89□□□□□ -0.19
TNXB-209ENST00000613214 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 CD200P41217 278 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 FNDC7Q5VTL7 733 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 UBALD2Q8IYN6 164 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 COMMD1Q8N668 190 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 PECRQ9BY49 303 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 DSCR4P56555 118 aaPredicted RBP13.89□□□□□ -0.19
TNXB-209ENST00000613214 SEZ6L2Q6UXD5 910 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 TARM1B6A8C7 271 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 OR5H8P0DN80 308 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 NME1P15531 152 aaKnown RBP13.89□□□□□ -0.19
TNXB-209ENST00000613214 SLC35E4Q6ICL7 350 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 NANOGP1Q8N7R0 232 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 RAB18Q9NP72 206 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 CNTRLQ7Z7A1 2325 aa13.89□□□□□ -0.19
TNXB-209ENST00000613214 TAF1P21675 1872 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
TNXB-209ENST00000613214 ZNF774Q6NX45 483 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 PRSS41Q7RTY9 318 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 ACER3Q9NUN7 267 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 SPAARA0A1B0GVQ0 90 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 DYNLRB2Q8TF09 96 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 CSN3P07498 182 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 PPP1CAP62136 330 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 CDK5Q00535 292 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 LRRC29Q8WV35 223 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 SMIM12Q96EX1 92 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 PELI1Q96FA3 418 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 MYOZ1Q9NP98 299 aaPredicted RBP13.88□□□□□ -0.19
TNXB-209ENST00000613214 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 KLK4Q9Y5K2 254 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 NUP98P52948 1817 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 IGHV5-51A0A0C4DH38 117 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 TO15178 435 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 DCTDP32321 178 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 BSGP35613 385 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 FZD5Q13467 585 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 KIRREL2Q6UWL6 708 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 MRGPREQ86SM8 312 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 OR2A14Q96R47 310 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 NIT2Q9NQR4 276 aa13.88□□□□□ -0.19
TNXB-209ENST00000613214 RNASEK-C17orf49H0YIS7 233 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 AKR7A2O43488 359 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
TNXB-209ENST00000613214 CNN1P51911 297 aaKnown RBP13.87□□□□□ -0.19
TNXB-209ENST00000613214 VMA21Q3ZAQ7 101 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 UBTD2Q8WUN7 234 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 PRR13Q9NZ81 148 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 H0YIG0 161 aa13.87□□□□□ -0.19
TNXB-209ENST00000613214 GALNSP34059 522 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms