RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ARG1P05089 322 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 MGMTP16455 207 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PRSS3P35030 304 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 RAP1BP61224 184 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 RAP1AP62834 184 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PLCXD3Q63HM9 321 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 OGFOD3Q6PK18 319 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 BAIAP2L2Q6UXY1 529 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 NPSR1Q6W5P4 371 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 ETV3LQ6ZN32 361 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 OR10D3Q8NH80 312 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 MFSD8Q8NHS3 518 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 ELP5Q8TE02 316 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PPP1R1CQ8WVI7 109 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 AKR1E2Q96JD6 320 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 FN3KRPQ9HA64 309 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 LTBP2Q14767 1821 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 OR6C76A6NM76 312 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 H3BMH7 237 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 HPP00738 406 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 CD3DP04234 171 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 TPT1P13693 172 aaKnown RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 LY6DQ14210 128 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SEMA6DQ8NFY4 1073 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 OR51D1Q8NGF3 324 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 DMRTA2Q96SC8 542 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 C1orf198Q9H425 327 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SLC22A13Q9Y226 551 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 A1L4Q6 167 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 EIF1BO60739 113 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 DPM1O60762 260 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ACTC1P68032 377 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ACTA1P68133 377 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 IL13RA1P78552 427 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 MRM1Q6IN84 353 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 PGAP1Q75T13 922 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 MAML2Q8IZL2 1156 aaPredicted RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 PLPP7Q8NBV4 271 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TOMM40LQ969M1 308 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 RAB3CQ96E17 227 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 POTEKPQ9BYX7 375 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TOLLIPQ9H0E2 274 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 FKRPQ9H9S5 495 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 KCNG2Q9UJ96 466 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 HELZP42694 1942 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 A0A1B0GTH9 108 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 OR5H15A6NDH6 313 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 CDC14BO60729 498 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 YIF1AO95070 293 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF205O95201 554 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 CNOT4O95628 575 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 PMP2P02689 132 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 GLI4P10075 376 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 IRF2P14316 349 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 SRMP19623 302 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 APOBEC1P41238 236 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF83P51522 516 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 PCBP3P57721 371 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 FXYD4P59646 89 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ACTBL2Q562R1 376 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ASCL5Q7RTU5 278 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TIPARPQ7Z3E1 657 aaKnown RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 UBALD1Q8TB05 177 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 VSTM2LQ96N03 204 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 CHST11Q9NPF2 352 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 FTCDNL1E5RQL4 147 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TSTD3H0UI37 97 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 CDC42EP2O14613 210 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 GP1BAP07359 652 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 LTBQ06643 244 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 LIPNQ5VXI9 398 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF227Q86WZ6 799 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 SLAMF9Q96A28 289 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 TEAD3Q99594 435 aa9.66□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF275Q9NSD4 429 aaPredicted RBP9.66□□□□□ -0.86
FAM3A-221ENST00000612856 DUSP1P28562 367 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 SSTP61278 116 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 CDK5Q00535 292 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 PDCD1Q15116 288 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 TRAM1Q15629 374 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 AKR1C8PQ5T2L2 129 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF626Q68DY1 528 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 BEND4Q6ZU67 534 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 CCDC54Q8NEL0 328 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF681Q96N22 645 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 FAM173AQ9BQD7 235 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 OR51M1Q9H341 326 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 PIPOXQ9P0Z9 390 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms