RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GRB2P62993 217 aaKnown RBP12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF239Q16600 458 aaKnown RBP12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 C6orf201Q7Z4U5 140 aa12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 GJC3Q8NFK1 279 aa12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA3-202ENST00000612467 MGMTP16455 207 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 CCL1P22362 96 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 PTGFRP43088 359 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 PDCD1Q15116 288 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 NKAPLQ5M9Q1 402 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 RHBDD1Q8TEB9 315 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 SSC4DQ8WTU2 575 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 CT55Q8WUE5 264 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 DYRK2Q92630 601 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 SGK3Q96BR1 496 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 LAMA5O15230 3695 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 hCG_1807616A0A1W2PRN6 198 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 CER1O95813 267 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 HPNP05981 417 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 HOXA6P31267 233 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 RGS19P49795 217 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 GGNQ86UU5 652 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 CDH26Q8IXH8 852 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 TMEM230Q96A57 120 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 C5orf66Q9H5L9 145 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 LOXL2Q9Y4K0 774 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 KCNMB2Q9Y691 235 aa12.32□□□□□ -0.44
PCDHGA3-202ENST00000612467 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 FAM230AA0A1W2PPH8 454 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MFNGO00587 321 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 CBR3O75828 277 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 LUMP51884 338 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 GMFBP60983 142 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 LSM6P62312 80 aaKnown RBP12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 RAC1P63000 192 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 SRYQ05066 204 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 IKZF1Q13422 519 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MPPED2Q15777 294 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 HDDC2Q7Z4H3 204 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 NAXDQ8IW45 347 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR10A2Q9H208 303 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 SLC2A8Q9NY64 477 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 A0A087WZY1 265 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 C5orf51A6NDU8 294 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MSTNO14793 375 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 DHRS3O75911 302 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 P04436 131 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 CELA3AP09093 270 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 SERPINF1P36955 418 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 AMY2BP19961 511 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 GLRA1P23415 457 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 CARD18P57730 90 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZXDAP98168 799 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZMYND11Q15326 602 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 CDCP2Q5VXM1 449 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 GALNTL5Q7Z4T8 443 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 STPG2Q8N412 459 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR13G1Q8NGZ3 307 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR1S1Q8NH92 325 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 SCARB1Q8WTV0 552 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 PIGQQ9BRB3 760 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 ARRDC1-AS1Q9H2J1 176 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MBD2Q9UBB5 411 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 MCTS1Q9ULC4 181 aaKnown RBP12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 PADI1Q9ULC6 663 aa12.31□□□□□ -0.44
PCDHGA3-202ENST00000612467 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 A0A1W2PNU3 283 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 FAM221AA4D161 298 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 SHOXO15266 292 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 B3GALNT1O75752 331 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 IGLV3-1P01715 115 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 RPA2P15927 270 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF32P17041 273 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 CSNK2A1P68400 391 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 C11orf87Q6NUJ2 197 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 NAA11Q9BSU3 229 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 GPR160Q9UJ42 338 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms