RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	SPIC	Q8N5J4	248 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	ST8SIA1	Q92185	356 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	EMG1	Q92979	244 aa	Known RBP	12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	DUSP23	Q9BVJ7	150 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	FSCN3	Q9NQT6	498 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	SLC39A9	Q9NUM3	307 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	UFSP2	Q9NUQ7	469 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	SLCO1B1	Q9Y6L6	691 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	BDP1	A6H8Y1	2624 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571		A0A1W2PP11	408 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571		A0A1W2PPV4	95 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	OR5H15	A6NDH6	313 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	TNFSF11	O14788	317 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	NRAS	P01111	189 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	SNRPE	P62304	92 aa	Known RBP	12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	TRIM61	Q5EBN2	209 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	WDR5B	Q86VZ2	330 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	HPSE2	Q8WWQ2	592 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	SERTAD4	Q9NUC0	356 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	DUSP13	Q9UII6	198 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	TP53TG5	Q9Y2B4	290 aa		12.37	□□□□□ -0.43
MUC1-223	ENST00000611571	DHH	O43323	396 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	OR2C1	O95371	312 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	ZIC2	O95409	532 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	FLI1	Q01543	452 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	EDDM3A	Q14507	147 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	CD200R1L	Q6Q8B3	271 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	TMEM104	Q8NE00	496 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	AK3	Q9UIJ7	227 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	GAB2	Q9UQC2	676 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	PPP1R3C	Q9UQK1	317 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	SIT1	Q9Y3P8	196 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	CREBBP	Q92793	2442 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	ONECUT2	O95948	504 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	IAPP	P10997	89 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	CLPP	Q16740	277 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	SPANXN5	Q5MJ07	72 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	RPUSD3	Q6P087	351 aa	Known RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	NR2C2AP	Q86WQ0	139 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	GPBAR1	Q8TDU6	330 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	ASB5	Q8WWX0	329 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	TMEM229A	B2RXF0	380 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	TBX6	O95947	436 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	IFNA4	P05014	189 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	DEFA6	Q01524	100 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	EDA	Q92838	391 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	SLC25A38	Q96DW6	304 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	PLEKHA3	Q9HB20	300 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	RNF150	Q9ULK6	438 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571	PKDREJ	Q9NTG1	2253 aa		12.36	□□□□□ -0.43
MUC1-223	ENST00000611571		A0A087WZY1	265 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	RNASEK-C17orf49	H0YIS7	233 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	HMGB3	O15347	200 aa	Known RBP	12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	FOXS1	O43638	330 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	GPR137B	O60478	399 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	NXPH2	O95156	264 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	GLA	P06280	429 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	HOXB9	P17482	250 aa	Predicted RBP	12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SPATA46	Q5T0L3	261 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	MITD1	Q8WV92	249 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	MS4A3	Q96HJ5	214 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	PIGQ	Q9BRB3	760 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	OPA3	Q9H6K4	179 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571		A0A087WV48	116 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	RAB19	A4D1S5	217 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	C5orf49	A4QMS7	147 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	LMX1B	O60663	402 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SHB	Q15464	509 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	RTL6	Q6ICC9	239 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	DPPA2	Q7Z7J5	298 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SHISA5	Q8N114	240 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	ADAD2	Q8NCV1	583 aa	Known RBP	12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	GNG12	Q9UBI6	72 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571		A0A1W2PQF6	199 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	ALG1L2	C9J202	215 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	PLPP3	O14495	311 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	PNP	P00491	289 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	CCL2	P13500	99 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	PNLIP	P16233	465 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	GPR3	P46089	330 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	HAAO	P46952	286 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SELENOV	P59797	346 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNF266	Q14584	549 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SYT13	Q7L8C5	426 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	THNSL2	Q86YJ6	484 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	MRPL41	Q8IXM3	137 aa	Known RBP	12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	FAM24B	Q8N5W8	94 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	BVES	Q8NE79	360 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	OR5AP2	Q8NGF4	316 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	CRLF2	Q9HC73	371 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	ZFP64	Q9NPA5	681 aa		12.35	□□□□□ -0.43
MUC1-223	ENST00000611571	SFTA3	P0C7M3	94 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	MIDN	Q504T8	468 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	OR5M9	Q8NGP3	310 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNF764	Q96H86	408 aa	Predicted RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	OXGR1	Q96P68	337 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms