RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 RNFT2Q96EX2 444 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 PKNOX2Q96KN3 472 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 RBM14Q96PK6 669 aaKnown RBP5.37□□□□□ -1.55
MUC1-221ENST00000610359 CDRT15Q96T59 188 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 SYT4Q9H2B2 425 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 RERGLQ9H628 205 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 WDR55Q9H6Y2 383 aaPredicted RBP5.37□□□□□ -1.55
MUC1-221ENST00000610359 DCLRE1BQ9H816 532 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 USE1Q9NZ43 259 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 NLKQ9UBE8 527 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 LINC00527Q9UJ94 153 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 RAP2CQ9Y3L5 183 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 LRP12Q9Y561 859 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 HSPG2P98160 4391 aa5.37□□□□□ -1.55
MUC1-221ENST00000610359 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 TRBV5-3A0A0A0MS03 114 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 DCTN6O00399 190 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 AHCYL1O43865 530 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 OR2F2O95006 317 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 RPLP1P05386 114 aaKnown RBP5.36□□□□□ -1.55
MUC1-221ENST00000610359 IGHV1-8P0DP01 117 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 IGHV4-30-4P0DP06 118 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 PSG2P11465 335 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 IFI30P13284 250 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 ZNF823P16415 610 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 GPX2P18283 190 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 VAMP1P23763 118 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 MTNR1BP49286 362 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 POLR2JP52435 117 aaKnown RBP5.36□□□□□ -1.55
MUC1-221ENST00000610359 CRYBA2P53672 197 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 PIN1Q13526 163 aaPredicted RBP5.36□□□□□ -1.55
MUC1-221ENST00000610359 FHL3Q13643 280 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 KIR2DS1Q14954 304 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 RFX4Q33E94 735 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 LRIF1Q5T3J3 769 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 PLBD1Q6P4A8 553 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 DHDDSQ86SQ9 333 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 Q8N1Y9 231 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 OR8U1Q8NH10 309 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 IL17DQ8TAD2 202 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 TAMM41Q96BW9 452 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 BPIFA2Q96DR5 249 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 SDSLQ96GA7 329 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 TSSK2Q96PF2 358 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 PITX2Q99697 317 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 ATF6BQ99941 703 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 FGF23Q9GZV9 251 aaPredicted RBP5.36□□□□□ -1.55
MUC1-221ENST00000610359 NUAK2Q9H093 628 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 SP140LQ9H930 580 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 ZIM2Q9NZV7 527 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 VAPAQ9P0L0 249 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 KIAA1456Q9P272 454 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 RIMS3Q9UJD0 308 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 HAO1Q9UJM8 370 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 POLR1DQ9Y2S0 133 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 MED31Q9Y3C7 131 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 GMEB1Q9Y692 573 aa5.36□□□□□ -1.55
MUC1-221ENST00000610359 PKD1P98161 4303 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 MEX3AA1L020 520 aaKnown RBP5.35□□□□□ -1.55
MUC1-221ENST00000610359 M0R135 149 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 DEDDO75618 318 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 TIPRLO75663 272 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 TNFRSF1BP20333 461 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 CNTFRP26992 372 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 CASQ1P31415 396 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 MDH1P40925 334 aaKnown RBP5.35□□□□□ -1.55
MUC1-221ENST00000610359 INSL3P51460 131 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 TPTEP56180 551 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 DYNC1I2Q13409 638 aaKnown RBP5.35□□□□□ -1.55
MUC1-221ENST00000610359 NFYCQ13952 458 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 SRSF7Q16629 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
MUC1-221ENST00000610359 HAGHQ16775 308 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 FAM27D1Q5T7N8 215 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 PTCHD4Q6ZW05 846 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 TMPRSS11FQ6ZWK6 438 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 OR13C2Q8NGS9 318 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 OR13D1Q8NGV5 346 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 OR2T27Q8NH04 317 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 CHPT1Q8WUD6 406 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 ZNF799Q96GE5 643 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 AKR1E2Q96JD6 320 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 NABP2Q9BQ15 211 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 YY1AP1Q9H869 796 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 RETNQ9HD89 108 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 SDR39U1Q9NRG7 319 aaPredicted RBP5.35□□□□□ -1.55
MUC1-221ENST00000610359 TBC1D23Q9NUY8 699 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 GRHPRQ9UBQ7 328 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 PYCARDQ9ULZ3 195 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 HHLA2Q9UM44 414 aa5.35□□□□□ -1.55
MUC1-221ENST00000610359 hCG_1809904A0A1W2PP81 198 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 A0A1W2PPE2 198 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 A0A1W2PPH5 198 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 A0A1W2PR64 198 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 A0A1W2PRV1 198 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 LINC01548A6NM66 108 aa5.34□□□□□ -1.55
MUC1-221ENST00000610359 ANKRD30BLA7E2S9 258 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms