RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 APOA2P02652 100 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 CHRNB4P30926 498 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 MESTQ5EB52 335 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 FAM185AQ8N0U4 392 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 EXTL1Q92935 676 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 GNPNAT1Q96EK6 184 aaPredicted RBP12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
PCDHB16-201ENST00000609684 DHRS3O75911 302 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 FUT3P21217 361 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 THBS3P49746 956 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 EMP3P54852 163 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 PDCD1Q15116 288 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF774Q6NX45 483 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 NPEPL1Q8NDH3 523 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OR1J1Q8NGS3 322 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 GPA33Q99795 319 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 LIN7CQ9NUP9 197 aaKnown RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ATP23Q9Y6H3 246 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 MT-CO3P00414 261 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 IGHA1P01876 353 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF32P17041 273 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZFP36L2P47974 494 aaKnown RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 WFDC8Q8IUA0 241 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 NUBPLQ8TB37 319 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF275Q9NSD4 429 aaPredicted RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 SCN3AQ9NY46 2000 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 SCAF4O95104 1147 aaKnown RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 HLA-HP01893 362 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 SLC37A1P57057 533 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OR52N4Q8NGI2 321 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ASB13Q8WXK3 278 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OIP5O43482 229 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 IAPPP10997 89 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OR5M9Q8NGP3 310 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 OIT3Q8WWZ8 545 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 CES1P1Q9UKY3 287 aa12.72□□□□□ -0.37
PCDHB16-201ENST00000609684 PTGFRP43088 359 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 RAC1P63000 192 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 ZBTB37Q5TC79 503 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 TEX261Q6UWH6 196 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 LCN15Q6UWW0 184 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 D2HGDHQ8N465 521 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 OR10Z1Q8NGY1 313 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 OR10D3Q8NH80 312 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 TECTBQ96PL2 329 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 RNF150Q9ULK6 438 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 U3KQ87 197 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 BCL2L11O43521 198 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 ADRB1P08588 477 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 CD96P40200 585 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 HES1Q14469 280 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 HAGHQ16775 308 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 ADPRHL1Q8NDY3 354 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 ZNF230Q9UIE0 474 aaPredicted RBP12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 NUDT19A8MXV4 375 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 ACKR3P25106 362 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 P2RX3P56373 397 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 LGALS4P56470 323 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 CD300CQ08708 224 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 EIF3IQ13347 325 aaKnown RBP12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 FAM122CQ6P4D5 195 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 CISD2Q8N5K1 135 aaKnown RBP12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 RASL10BQ96S79 203 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 SHARPINQ9H0F6 387 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 DLL4Q9NR61 685 aa12.71□□□□□ -0.37
PCDHB16-201ENST00000609684 OR5H15A6NDH6 313 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A8P0DMV1 189 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A9P0DMV2 189 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 PDZK1IP1Q13113 114 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 IRF3Q14653 427 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A2Q5DJT8 189 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 SLC25A30Q5SVS4 291 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 ZFP62Q8NB50 900 aaPredicted RBP12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 PTPMT1Q8WUK0 201 aaPredicted RBP12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms