RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ATPIF1Q9UII2 106 aa10.18□□□□□ -0.78
HLA-F-230ENST00000606273 RRP15Q9Y3B9 282 aaKnown RBP10.18□□□□□ -0.78
HLA-F-230ENST00000606273 SOX21Q9Y651 276 aaPredicted RBP10.18□□□□□ -0.78
HLA-F-230ENST00000606273 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 IGLV3-9A0A075B6K5 115 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 LYNP07948 512 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 SBK2P0C263 348 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 SLC2A1P11166 492 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF250P15622 560 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 OPRL1P41146 370 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 CRYBB2P43320 205 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 PRKXP51817 358 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 AQP4P55087 323 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 RAG2P55895 527 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 RIPK1Q13546 671 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 SMN1Q16637 294 aaKnown RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 SNAI3Q3KNW1 292 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 LCN1P1Q5VSP4 162 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF691Q5VV52 312 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 LAIR2Q6ISS4 152 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 RGS7BPQ6MZT1 257 aaPredicted RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 LRRN1Q6UXK5 716 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 GID4Q8IVV7 300 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 SLC35F2Q8IXU6 374 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 KLF14Q8TD94 323 aaPredicted RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 CNN2Q99439 309 aaKnown RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 TBX5Q99593 518 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 COPS4Q9BT78 406 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 ADI1Q9BV57 179 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 BCL2L14Q9BZR8 327 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 YIPF3Q9GZM5 350 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 AMBNQ9NP70 447 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 C8orf4Q9NR00 106 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 MMP26Q9NRE1 261 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 TBCCD1Q9NVR7 557 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF319Q9P2F9 582 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 EIF3KQ9UBQ5 218 aaKnown RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 WARS2Q9UGM6 360 aaKnown RBP10.17□□□□□ -0.78
HLA-F-230ENST00000606273 WIPI2Q9Y4P8 454 aa10.17□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF878C9JN71 531 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 M0R135 149 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 MTNR1AP48039 350 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 LOXL3P58215 753 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 ISL1P61371 349 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 ECH1Q13011 328 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 FAM189A2Q15884 450 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 PRSS45Q7RTY3 260 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 DHRSXQ8N5I4 330 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF555Q8NEP9 628 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 CNIH3Q8TBE1 160 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 KCNJ15Q99712 375 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 MS4A7Q9GZW8 240 aaPredicted RBP10.16□□□□□ -0.78
HLA-F-230ENST00000606273 PTTG3PQ9NZH4 202 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 C1RLQ9NZP8 487 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 LAMP5Q9UJQ1 280 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 AUP1Q9Y679 476 aa10.16□□□□□ -0.78
HLA-F-230ENST00000606273 A0A1W2PQL4 384 aaPredicted RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 J3QRE1 110 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 NDUFA7O95182 113 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 LCATP04180 440 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 CAPGP40121 348 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 TPTEP56180 551 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 CXCR4P61073 352 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 RPS23P62266 143 aaKnown RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 CCL8P80075 99 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 IL5RAQ01344 420 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF85Q03923 595 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF91Q05481 1191 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 PSG7Q13046 419 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 ZNF154Q13106 437 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 HNRNPA0Q13151 305 aaKnown RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 MBNL2Q5VZF2 373 aaKnown RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 PLEKHG7Q6ZR37 379 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 USP51Q70EK9 711 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 OR2AE1Q8NHA4 323 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 SYNPRQ8TBG9 265 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 MRAPQ8TCY5 172 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 TFAP2CQ92754 450 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 PPP1R14AQ96A00 147 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 APOBEC3DQ96AK3 386 aaPredicted RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 LGALS12Q96DT0 336 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 RNFT2Q96EX2 444 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 DCLRE1CQ96SD1 692 aaKnown RBP10.15□□□□□ -0.78
HLA-F-230ENST00000606273 APOL4Q9BPW4 351 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 ELOVL3Q9HB03 270 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 CLN6Q9NWW5 311 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 TAAR3PQ9P1P4 343 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 FBLN5Q9UBX5 448 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 MYRFQ9Y2G1 1151 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 LRP12Q9Y561 859 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 N6AMT1Q9Y5N5 214 aa10.15□□□□□ -0.78
HLA-F-230ENST00000606273 TRAPPC2LH3BP13 241 aa10.14□□□□□ -0.79
HLA-F-230ENST00000606273 HOXA3O43365 443 aaPredicted RBP10.14□□□□□ -0.79
HLA-F-230ENST00000606273 IGHV3-13P01766 116 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms