RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PRKXP51817 358 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SPIBQ01892 262 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZNRF1Q8ND25 227 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR10Z1Q8NGY1 313 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR5K1Q8NHB7 308 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MICU1Q9BPX6 476 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 PAPOLGQ9BWT3 736 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 NLKQ9UBE8 527 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 KCNG2Q9UJ96 466 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 BIRC6Q9NR09 4857 aa12.38□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR2AT4A6NND4 320 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 NOS3P29474 1203 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OTX1P32242 354 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ERVFRD-1P60508 538 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MXRA7P84157 204 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 DGCR2P98153 550 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 IL5RAQ01344 420 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TIGD6Q17RP2 521 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 WDR93Q6P2C0 686 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SLC16A9Q7RTY1 509 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 PIGWQ7Z7B1 504 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 LINC00482Q8N8I6 264 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR51D1Q8NGF3 324 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR8J3Q8NGG0 315 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TLNRD1Q9H1K6 362 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 PALMDQ9NP74 551 aa12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ARG1P05089 322 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 GLRA1P23415 457 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MAGOHP61326 146 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FAM3AP98173 230 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SSX2Q16385 188 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TCTEX1D4Q5JR98 221 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 KCTD8Q6ZWB6 473 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZBTB46Q86UZ6 589 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 CYP4Z1Q86W10 505 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FTMTQ8N4E7 242 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR4K13Q8NH42 304 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RPL3LQ92901 407 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MALSU1Q96EH3 234 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 KCNJ15Q99712 375 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ANKRD19PQ9H560 264 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 C19orf12Q9NSK7 152 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 CENPMQ9NSP4 180 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TBL2Q9Y4P3 447 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 LRP12Q9Y561 859 aa12.36□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 UNC119BA6NIH7 251 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FAM90A8PA6NJQ4 464 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RPS27P42677 84 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FXYD6P3P58550 94 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RPL31P62899 125 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SNCBQ16143 134 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FKBP9P1Q75LS8 142 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 Q8NFD4 153 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZNF649Q9BS31 505 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FN3KQ9H479 309 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 MRPL22Q9NWU5 206 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 USE1Q9NZ43 259 aa12.35□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 LCE6AA0A183 80 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TMEM210A6NLX4 147 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FAM220BPB1ANY3 271 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RHBDL1O75783 438 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ZNF682O95780 498 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ANXA2P07355 339 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 CFL1P23528 166 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SLC25A1P53007 311 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 GFOD2Q3B7J2 385 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 IFI44LQ53G44 452 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 KCTD18Q6PI47 426 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 DCXRQ7Z4W1 244 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 CSNK2A3Q8NEV1 391 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 OR2T12Q8NG77 320 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 CAPSLQ8WWF8 208 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 TFAP2CQ92754 450 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 ASCL2Q99929 193 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 PPP1R3EQ9H7J1 279 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 SP140LQ9H930 580 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RHBDD3Q9Y3P4 386 aa12.34□□□□□ -0.43
NEDD8-MDP1-204ENST00000605847 RYR2Q92736 4967 aa12.33□□□□□ -0.44
NEDD8-MDP1-204ENST00000605847 IGKV1D-17A0A075B6S4 117 aa12.33□□□□□ -0.44
NEDD8-MDP1-204ENST00000605847 RAMP3O60896 148 aa12.33□□□□□ -0.44
NEDD8-MDP1-204ENST00000605847 LYL1P12980 280 aa12.33□□□□□ -0.44
NEDD8-MDP1-204ENST00000605847 SLC6A6P31641 620 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms