RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 OR5AC2Q9NZP5 309 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 C19orf25Q9UFG5 118 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 WDPCPO95876 746 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 GLRA1P23415 457 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 BLVRBP30043 206 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 OR3A2P47893 321 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 CSNK2A1P68400 391 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 CYCSP99999 105 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 ECH1Q13011 328 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 UBE2V2Q15819 145 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF239Q16600 458 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 PEG10Q86TG7 708 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 LHFPL1Q86WI0 220 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 FAM89BQ8N5H3 189 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 CSNK2A3Q8NEV1 391 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF385AQ96PM9 386 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 CYTL1Q9NRR1 136 aa17.77■□□□□ 0.43
SHKBP1-225ENST00000600733 SIGLEC6O43699 453 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 TLX3O43711 291 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 HPNP05981 417 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 TPT1P13693 172 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 ADH6P28332 368 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 EPHA8P29322 1005 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 CSNK1A1P48729 337 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 TMED6Q8WW62 240 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 OR10C1Q96KK4 312 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 NKX6-2Q9C056 277 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 RAB18Q9NP72 206 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 EHFQ9NZC4 300 aa17.76■□□□□ 0.43
SHKBP1-225ENST00000600733 LOC102725191A0A1B0GVB3 256 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 PRF1P14222 555 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 MSR1P21757 451 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 BAP18Q8IXM2 172 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 CCDC36Q8IYA8 594 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 GNRHR2Q96P88 292 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 UCN2Q96RP3 112 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 OSGIN2Q9Y236 505 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 FOXI3A8MTJ6 420 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 G3V3Y1 287 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 K7ESF4 209 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 FGF16O43320 207 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 IGLV3-1P01715 115 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 GUCA1AP43080 201 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 LSM6P62312 80 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 H3F3AP84243 136 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 ENDOGQ14249 297 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 MRPL14Q6P1L8 145 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 SLC30A7Q8NEW0 376 aa17.75■□□□□ 0.43
SHKBP1-225ENST00000600733 DBHP09172 617 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 FCGR2AP12318 317 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 PNLIPP16233 465 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 CTSSP25774 331 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 CBX5P45973 191 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 AIMP2Q13155 320 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 FAM189A2Q15884 450 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 RSPO1Q2MKA7 263 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 OR51F2Q8NH61 342 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 PIGTQ969N2 578 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 CDC6Q99741 560 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 PECRQ9BY49 303 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 NELFAQ9H3P2 528 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 METTL8Q9H825 291 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 ELL3Q9HB65 397 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 SLC39A1Q9NY26 324 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 FREM2Q5SZK8 3169 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 TP53I11O14683 189 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 DHRS3O75911 302 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 TSPAN9O75954 239 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 ONECUT2O95948 504 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 ACTL6AO96019 429 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 NAT2P11245 290 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 PCOLCEQ15113 449 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 NKAPLQ5M9Q1 402 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 DRAM2Q6UX65 266 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 GJC3Q8NFK1 279 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 NABP1Q96AH0 204 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 SLC26A1Q9H2B4 701 aa17.74■□□□□ 0.43
SHKBP1-225ENST00000600733 RAB19A4D1S5 217 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 GPR31O00270 319 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ATG12O94817 140 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 RPS2P15880 293 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 UQCC3Q6UW78 93 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 Q7L0L9 218 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 TMEM200AQ86VY9 491 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 DUSP23Q9BVJ7 150 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 RBM24Q9BX46 236 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF701Q9NV72 531 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 PIGLQ9Y2B2 252 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 IGKV1D-8A0A087WSZ0 117 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 TMEM218A2RU14 115 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ABCD4O14678 606 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 KNG1P01042 644 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 CD63P08962 238 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ICAM2P13598 275 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ADCYAP1P18509 176 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 CXCL12P48061 93 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 TAS2R46P59540 309 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 SRSF3P84103 164 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 RAB32Q13637 225 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF169Q14929 603 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms