RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 KRT8P05787 483 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 ATP6V1B1P15313 513 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 FAHP16930 419 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 PSMB10P40306 273 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 MAP2K3P46734 347 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
RPS28-203ENST00000600659 LCN2P80188 198 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 PAX2Q02962 417 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 TP53I3Q53FA7 332 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 DMRTC1Q5HYR2 192 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 WDR38Q5JTN6 314 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 TMEM42Q69YG0 159 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 LYPD2Q6UXB3 125 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 ZNF841Q6ZN19 808 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 YIPF7Q8N8F6 280 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 OR11L1Q8NGX0 322 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 AMBNQ9NP70 447 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 MRPS18AQ9NVS2 196 aaKnown RBP13.15□□□□□ -0.3
RPS28-203ENST00000600659 CTSZQ9UBR2 303 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
RPS28-203ENST00000600659 PPIAL4CA0A0B4J2A2 164 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 A6NLC8 198 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 LGALS8O00214 317 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 P2RY10O00398 339 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 MPZL2O60487 215 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 IRF2P14316 349 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 CFHR2P36980 270 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 ELF3P78545 371 aaPredicted RBP13.14□□□□□ -0.31
RPS28-203ENST00000600659 IL5RAQ01344 420 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 SNCBQ16143 134 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 SMN1Q16637 294 aaKnown RBP13.14□□□□□ -0.31
RPS28-203ENST00000600659 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 TEX36Q5VZQ5 186 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
RPS28-203ENST00000600659 ZDHHC23Q8IYP9 409 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 PIGCQ92535 297 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 RNPEPL1Q9HAU8 725 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 MMP26Q9NRE1 261 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 NKX1-2Q9UD57 310 aaPredicted RBP13.14□□□□□ -0.31
RPS28-203ENST00000600659 GTF2A1LQ9UNN4 478 aa13.14□□□□□ -0.31
RPS28-203ENST00000600659 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
RPS28-203ENST00000600659 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 PHF1O43189 567 aaPredicted RBP13.13□□□□□ -0.31
RPS28-203ENST00000600659 FOXH1O75593 365 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 SRD5A1P18405 259 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 GNALP38405 381 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 OR12D2P58182 307 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
RPS28-203ENST00000600659 ACTC1P68032 377 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 ACTA1P68133 377 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 MZT1Q08AG7 82 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 RIPPLY1Q0D2K3 151 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 DCDC5Q6ZRR9 648 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 COMMD2Q86X83 199 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 ACBD7Q8N6N7 88 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 DEFB108BQ8NET1 73 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 LRRC29Q8WV35 223 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 RPL3LQ92901 407 aaKnown RBP13.13□□□□□ -0.31
RPS28-203ENST00000600659 SEH1LQ96EE3 360 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 RTL8AQ9BWD3 113 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 C8orf4Q9NR00 106 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 GNG8Q9UK08 70 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 PCDHB10Q9UN67 800 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 PIGLQ9Y2B2 252 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 LRCH1Q9Y2L9 728 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 OOEPA6NGQ2 149 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 DHRS7CA6NNS2 312 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 CDIPTO14735 213 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 FSHBP01225 129 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 RPS2P15880 293 aaKnown RBP13.13□□□□□ -0.31
RPS28-203ENST00000600659 ZNF12P17014 697 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 AMY2BP19961 511 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 LAIR2Q6ISS4 152 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 FDX2Q6P4F2 183 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 OR52I1Q8NGK6 324 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 OR2G2Q8NGZ5 317 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 CNIH3Q8TBE1 160 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 NEIL1Q96FI4 390 aaPredicted RBP13.13□□□□□ -0.31
RPS28-203ENST00000600659 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 MIOXQ9UGB7 285 aa13.13□□□□□ -0.31
RPS28-203ENST00000600659 A0A0G2JMP0 313 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 A0A0X1KG70 313 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 A0A1B0GW55 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms