RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PLSCR4Q9NRQ2 329 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 IL2RAP01589 272 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 IL32P24001 234 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 IDH3GP51553 393 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MOB3CQ70IA8 216 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 FAM215AQ9Y5M1 114 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 BSNQ9UPA5 3926 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 RAB27BO00194 218 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 WDR1O75083 606 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 ALX3O95076 343 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 AGFG2O95081 481 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 SERPINA2P20848 420 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 HOXC12P31275 282 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 BTCP35070 178 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 AP3S2P59780 193 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 OR8B8Q15620 311 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 PCGF3Q3KNV8 242 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 FAAP20Q6NZ36 180 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 Q8NA96 180 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 UBASH3BQ8TF42 649 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 SPSB4Q96A44 273 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 BORCS8Q96FH0 119 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 C1orf147Q96MC9 270 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
HIF3A-218ENST00000600383 CACNG6Q9BXT2 260 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 HRASLSQ9HDD0 168 aa13.12□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF816-ZNF321PA0A0X1KG74 233 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 CDC14BO60729 498 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 TPPPO94811 219 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
HIF3A-218ENST00000600383 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 WNT5AP41221 380 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 C1orf185Q5T7R7 199 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-218ENST00000600383 BHLHE23Q8NDY6 225 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM59Q9BXS4 323 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 SELENOIQ9C0D9 397 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
HIF3A-218ENST00000600383 ANKRD20A5PA0PJZ0 165 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 H7C417 338 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 SPRY1O43609 319 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-218ENST00000600383 ANGPTL7O43827 346 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 GNB3P16520 340 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 PRKACBP22694 351 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 RBP2P50120 134 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 TBC1D28Q2M2D7 210 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 CDNFQ49AH0 187 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 RAB12Q6IQ22 244 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 Q6ZTK2 550 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF75AQ96N20 296 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
HIF3A-218ENST00000600383 POFUT1Q9H488 388 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 NUDT15Q9NV35 164 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 MTFP1Q9UDX5 166 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 KCNN3Q9UGI6 736 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 SLC7A11Q9UPY5 501 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 IGKV1-27A0A075B6S5 117 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM255AQ5JRV8 349 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 ALKBH2Q6NS38 261 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 OR2W3Q7Z3T1 314 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 CCDC36Q8IYA8 594 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 FAM57AQ8TBR7 257 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 SEH1LQ96EE3 360 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 MARVELD1Q9BSK0 173 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 CST11Q9H112 138 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 LPAR5Q9H1C0 372 aa13.1□□□□□ -0.31
HIF3A-218ENST00000600383 ZGRF1Q86YA3 2104 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms