RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ERCC1P07992 297 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 PPP3CBP16298 524 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 FSTP19883 344 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 HTR5AP47898 357 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZXDAP98168 799 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 DHRS13Q6UX07 377 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC36A1Q7Z2H8 476 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 FOXRED1Q96CU9 486 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 EDARQ9UNE0 448 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 CFAP47Q6ZTR5 3102 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 GABRA1P14867 456 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 CAPZA1P52907 286 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 KISS1Q15726 138 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 SNAI3Q3KNW1 292 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 C6orf15Q6UXA7 325 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC26A1Q9H2B4 701 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 WDR54Q9H977 334 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 GSKIPQ9P0R6 139 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 CBR3O75828 277 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 NMBP08949 121 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 CYB561P49447 251 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 MTCP1P56278 107 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 Q0VFX4 171 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 DTX1Q86Y01 620 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 FADS6Q8N9I5 356 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR13C8Q8NGS7 320 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF75AQ96N20 296 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 NELFAQ9H3P2 528 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 ACKR4Q9NPB9 350 aa10.14□□□□□ -0.79
ARHGEF1-220ENST00000600274 FAM74A7A6NL05 159 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 SNRPGP15A8MWD9 76 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 F12P00748 615 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 IL5P05113 134 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 HOXD4P09016 255 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 MLF1P58340 268 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 C21orf62-AS1Q17RA5 79 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF260Q3ZCT1 412 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PPP1R32Q7Z5V6 425 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR5AS1Q8N127 324 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMEM229BQ8NBD8 167 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR10D3Q8NH80 312 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PAQR8Q8TEZ7 354 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 DYRK2Q92630 601 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 UQCC2Q9BRT2 126 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 HDHD3Q9BSH5 251 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF700Q9H0M5 742 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CALHM2Q9HA72 323 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PROK2Q9HC23 129 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 IGKV1-9A0A0C4DH69 117 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 A0A1B0GV50 99 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR14I1A6ND48 311 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 SGCEO43556 437 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CELA3AP09093 270 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 OPRM1P35372 400 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 SUCLG1P53597 346 aaKnown RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 TAF9Q16594 264 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 C1orf100Q5SVJ3 147 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 DOK3Q7L591 496 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 FBXO17Q96EF6 278 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 A0A0A6YYD4 124 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CDC14BO60729 498 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 ATG12O94817 140 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CSTBP04080 98 aaKnown RBP10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 DLSTP36957 453 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 CLDN15P56746 228 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PLGLB1Q02325 96 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PCK2Q16822 640 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PLAC9Q5JTB6 97 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 C6orf201Q7Z4U5 140 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR6S1Q8NH40 331 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 ANGPTL4Q9BY76 406 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 LPAR5Q9H1C0 372 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 DEPPQ9NTK1 212 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
ARHGEF1-220ENST00000600274 LNP1A1A4G5 178 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 PINLYPA6NC86 204 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 NTN3O00634 580 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 RAD51DO75771 328 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 BPNT1O95861 308 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 MGMTP16455 207 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF32P17041 273 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZFP36L1Q07352 338 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 UBE2V2Q15819 145 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC16A14Q7RTX9 510 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 IL22RA1Q8N6P7 574 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 BHLHE23Q8NDY6 225 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 KCNG3Q8TAE7 436 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 LHFPL5Q8TAF8 219 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SCARB1Q8WTV0 552 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 PRRT1Q99946 306 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 URM1Q9BTM9 101 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMPRSS13Q9BYE2 586 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 EHFQ9NZC4 300 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 FOXJ2Q9P0K8 574 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms