RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PLPP7Q8NBV4 271 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 OR14K1Q8NGZ2 314 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 RAB39BQ96DA2 213 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 C4orf36Q96KX1 117 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 MICU1Q9BPX6 476 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ISG20L2Q9H9L3 353 aaKnown RBP12.76□□□□□ -0.37
LIG1-219ENST00000600055 MRPS18AQ9NVS2 196 aaKnown RBP12.76□□□□□ -0.37
LIG1-219ENST00000600055 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 PPIAL4AQ9Y536 164 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 V9GYS6 101 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 hCG_1807616A0A1W2PRN6 198 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 CEACAM18A8MTB9 384 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 H0YAE9 185 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 PLPP2O43688 288 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 FADS2O95864 444 aaKnown RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 MSMBP08118 114 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 EGR1P18146 543 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 CD80P33681 288 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 DVL1P1P54792 670 aaPredicted RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 NANOS3P60323 173 aaKnown RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 SEC61A1P61619 476 aaKnown RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 MOB3CQ70IA8 216 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 KRT74Q7RTS7 529 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 KCTD20Q7Z5Y7 419 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 KLHL36Q8N4N3 616 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 SETD9Q8NE22 299 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 DEFB108BQ8NET1 73 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 PELI1Q96FA3 418 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 POM121Q96HA1 1249 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 RNF170Q96K19 258 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 TMEM246Q9BRR3 403 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 RTL8AQ9BWD3 113 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 PATZ1Q9HBE1 687 aaKnown RBP12.75□□□□□ -0.37
LIG1-219ENST00000600055 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 ENPP5Q9UJA9 477 aa12.75□□□□□ -0.37
LIG1-219ENST00000600055 HIVEP2P31629 2446 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 F5H0A9 414 aaPredicted RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 H0YJX3 145 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 CDIPTO14735 213 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 CCL1P22362 96 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 GPM6AP51674 278 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 AQP4P55087 323 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 IL18R1Q13478 541 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 CR1LQ2VPA4 569 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 ZNF404Q494X3 552 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 LAIR2Q6ISS4 152 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 LYPD2Q6UXB3 125 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 Q6ZSR3 168 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 KCTD8Q6ZWB6 473 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 DOK3Q7L591 496 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 C8orf59Q8N0T1 100 aaPredicted RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 MUC20Q8N307 709 aaPredicted RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 OR51F2Q8NH61 342 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 TFAP2CQ92754 450 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 RPL3LQ92901 407 aaKnown RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 TMEM186Q96B77 213 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 FGF20Q9NP95 211 aaPredicted RBP12.74□□□□□ -0.37
LIG1-219ENST00000600055 GPR173Q9NS66 373 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 FRRS1LQ9P0K9 344 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 TLN2Q9Y4G6 2542 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 ABCA2Q9BZC7 2435 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 ZFHX3Q15911 3703 aa12.74□□□□□ -0.37
LIG1-219ENST00000600055 A0A1B0GVI7 797 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 SYT7O43581 403 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 NRASP01111 189 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 LHBP01229 141 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 HTR1AP08908 422 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 ACTA2P62736 377 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 ACTG2P63267 376 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 LCN2P80188 198 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 CEACAM21Q3KPI0 293 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 FDX2Q6P4F2 183 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 WDR82Q6UXN9 313 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 TLNRD1Q9H1K6 362 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 ABCB9Q9NP78 766 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 INPP5EQ9NRR6 644 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 HSPE1-MOB4S4R3N1 261 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 NF1P21359 2839 aa12.73□□□□□ -0.37
LIG1-219ENST00000600055 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms