RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 VHLLQ6RSH7 139 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 OR5AS1Q8N127 324 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
UPF1-206ENST00000598471 DNAAF1Q8NEP3 725 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 OR6M1Q8NGM8 313 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 BORCS8Q96FH0 119 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 SORCS2Q96PQ0 1159 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 UQCC2Q9BRT2 126 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 MMP27Q9H306 513 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 METTL17Q9H7H0 456 aaPredicted RBP13.25□□□□□ -0.29
UPF1-206ENST00000598471 CA10Q9NS85 328 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 KLF2Q9Y5W3 355 aaPredicted RBP13.25□□□□□ -0.29
UPF1-206ENST00000598471 RTTNQ86VV8 2226 aa13.25□□□□□ -0.29
UPF1-206ENST00000598471 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.24□□□□□ -0.29
UPF1-206ENST00000598471 WIPF3A6NGB9 483 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 SLC17A2O00624 439 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 CLPXO76031 633 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 CFPP27918 469 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 ZNF93P35789 620 aaPredicted RBP13.24□□□□□ -0.29
UPF1-206ENST00000598471 FUT6P51993 359 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 CAPZA1P52907 286 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 RAB11BQ15907 218 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 HES5Q5TA89 166 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 NR2C2APQ86WQ0 139 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 OR8G5Q8NG78 346 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 OR52N4Q8NGI2 321 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 ZNF671Q8TAW3 534 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 TMEM171Q8WVE6 324 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 GPER1Q99527 375 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 GFI1Q99684 422 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 SLC30A2Q9BRI3 323 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 C6orf62Q9GZU0 229 aaPredicted RBP13.24□□□□□ -0.29
UPF1-206ENST00000598471 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
UPF1-206ENST00000598471 SMURF1Q9HCE7 757 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 CRIM1Q9NZV1 1036 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 ABRACLQ9P1F3 81 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 PLEKHB1Q9UF11 243 aaPredicted RBP13.24□□□□□ -0.29
UPF1-206ENST00000598471 STEAP1Q9UHE8 339 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 DUSP13Q9UII6 198 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 GPR160Q9UJ42 338 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 FZR1Q9UM11 496 aa13.24□□□□□ -0.29
UPF1-206ENST00000598471 IGKV1-9A0A0C4DH69 117 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 IGHV3-13P01766 116 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 HTR2CP28335 458 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 S100A5P33763 92 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 RBP2P50120 134 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 ATP1B3P54709 279 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
UPF1-206ENST00000598471 OR8S1Q8NH09 359 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
UPF1-206ENST00000598471 SSC4DQ8WTU2 575 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 MRPL24Q96A35 216 aaKnown RBP13.23□□□□□ -0.29
UPF1-206ENST00000598471 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 TMEM100Q9NV29 134 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
UPF1-206ENST00000598471 PEX16Q9Y5Y5 336 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 PMF1-BGLAPU3KQ54 211 aa13.23□□□□□ -0.29
UPF1-206ENST00000598471 HCFC1P51610 2035 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 FAM230AA0A1W2PPH8 454 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 PLSCR5A0PG75 271 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 OR5B21A6NL26 309 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 CALCBP10092 127 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 SLC2A2P11168 524 aaPredicted RBP13.22□□□□□ -0.29
UPF1-206ENST00000598471 IGFBP2P18065 325 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 CA6P23280 308 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 MTCP1P56278 107 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 SCAND1P57086 179 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 MZT1Q08AG7 82 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 RIN1Q13671 783 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 OR8G1Q15617 311 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 KISS1Q15726 138 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 CEACAM21Q3KPI0 293 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 C1orf100Q5SVJ3 147 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 SPERTQ8NA61 448 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 OR5A2Q8NGI9 324 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 OR13G1Q8NGZ3 307 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 TSC22D3Q99576 134 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 ADAT1Q9BUB4 502 aaKnown RBP13.22□□□□□ -0.29
UPF1-206ENST00000598471 RTL8AQ9BWD3 113 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 CYSLTR2Q9NS75 346 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 NKIRAS2Q9NYR9 191 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 ADAM30Q9UKF2 790 aa13.22□□□□□ -0.29
UPF1-206ENST00000598471 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 SHISA9B4DS77 424 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 RGS5O15539 181 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 GOSR1O95249 250 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 CD37P11049 281 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
UPF1-206ENST00000598471 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 CEP19Q96LK0 163 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 S100A13Q99584 98 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 SYT3Q9BQG1 590 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 PLK3Q9H4B4 646 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 COMMD3Q9UBI1 195 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms