RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZAR1LA6NP61 321 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ZNF879B4DU55 563 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ECDO95905 644 aaPredicted RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 MAP2K3P46734 347 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ELF3P78545 371 aaPredicted RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 C11orf91Q3C1V1 193 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 AADACL4Q5VUY2 407 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 BTN2A1Q7KYR7 527 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 PNLDC1Q8NA58 520 aaKnown RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 ASB17Q8WXJ9 295 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 LRTOMTQ8WZ04 291 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 RPL3LQ92901 407 aaKnown RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 ITFG2Q969R8 447 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 HIST1H2AAQ96QV6 131 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 OR8B4Q96RC9 309 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 PKP2Q99959 881 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 PRRG3Q9BZD7 231 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 FGF23Q9GZV9 251 aaPredicted RBP12.49□□□□□ -0.41
LIG1-215ENST00000597901 PBOV1Q9GZY1 135 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 ABCB9Q9NP78 766 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
LIG1-215ENST00000597901 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 DNAJC9-AS1A6NH13 148 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 TMEM210A6NLX4 147 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 P2RY10O00398 339 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 TOX4O94842 621 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 HKR1P10072 659 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 AMY2BP19961 511 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 TGM4P49221 684 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 BPIFB3P59826 476 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 ARF6P62330 175 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 ATPAF1Q5TC12 328 aaPredicted RBP12.48□□□□□ -0.41
LIG1-215ENST00000597901 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 C12orf73Q69YU5 71 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 BRD3OSQ6XYD6 125 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 SCCPDHQ8NBX0 429 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 TMEM163Q8TC26 289 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 TBX15Q96SF7 602 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 CNN2Q99439 309 aaKnown RBP12.48□□□□□ -0.41
LIG1-215ENST00000597901 APOL4Q9BPW4 351 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 GABARAPL1Q9H0R8 117 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 HAO2Q9NYQ3 351 aa12.48□□□□□ -0.41
LIG1-215ENST00000597901 ZNF816-ZNF321PA0A0X1KG74 233 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 SLC22A31A6NKX4 558 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 CLDN34H7C241 214 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 M0R129 80 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 SFTPBP07988 381 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 FCGR1AP12314 374 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 MMP9P14780 707 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 ATP6V1B1P15313 513 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 POLR2IP36954 125 aaKnown RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 GMFBP60983 142 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 AWAT1Q58HT5 328 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 WDR38Q5JTN6 314 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 GPR157Q5UAW9 335 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 ZDHHC23Q8IYP9 409 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 FGFRL1Q8N441 504 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 FAM81AQ8TBF8 368 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 OR51E1Q8TCB6 317 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 C12orf43Q96C57 262 aaKnown RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 MNTQ99583 582 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 TTTY10Q9BZA0 68 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 WDR13Q9H1Z4 485 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 SEMA6AQ9H2E6 1030 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 ZMAT3Q9HA38 289 aaKnown RBP12.47□□□□□ -0.41
LIG1-215ENST00000597901 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
LIG1-215ENST00000597901 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 A0A1B0GW55 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 ZNF732B4DXR9 585 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 AKR7A2O43488 359 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 NDUFB3O43676 98 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 IGLV3-1P01715 115 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L2P0CJ85 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L3P0CJ86 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L4P0CJ87 422 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L5P0CJ88 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L6P0CJ89 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L7P0CJ90 424 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms