RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 DMKNQ6E0U4 476 aaPredicted RBP12.16□□□□□ -0.46
VRK3-213ENST00000597215 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 ZFP41Q8N8Y5 198 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 OR10AC1Q8NH08 325 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 YIPF5Q969M3 257 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 ITPKCQ96DU7 683 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 Q96MF0 132 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 OR5M11Q96RB7 305 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 RTL8AQ9BWD3 113 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 CHODLQ9H9P2 273 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 ZNF281Q9Y2X9 895 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 LYNX1G3V0Z9 82 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 PLPP2O43688 288 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 RP2O75695 350 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 CD1AP06126 327 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 LYNX1P0DP58 116 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 ZNF20P17024 532 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 CELP19835 753 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 COL8A2P25067 703 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 GATA4P43694 442 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 MAB21L1Q13394 359 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 CEACAM21Q3KPI0 293 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 OR51A4Q8NGJ6 313 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 GPR148Q8TDV2 347 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 C10orf105Q8TEF2 133 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
VRK3-213ENST00000597215 PP6455Q8WZ26 134 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 OR5P3Q8WZ94 311 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 GHSRQ92847 366 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 ERGIC1Q969X5 290 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 PIMREGQ9BSJ6 248 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 GCM1Q9NP62 436 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
VRK3-213ENST00000597215 DHDHQ9UQ10 334 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 DYSFO75923 2080 aa12.15□□□□□ -0.46
VRK3-213ENST00000597215 CREBBPQ92793 2442 aa12.15□□□□□ -0.47
VRK3-213ENST00000597215 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ANKRD61A6NGH8 418 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 A6NIN4 97 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 TMEM210A6NLX4 147 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 CLDN25C9JDP6 229 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 LMX1BO60663 402 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 GATBO75879 557 aaKnown RBP12.14□□□□□ -0.47
VRK3-213ENST00000597215 TNFAIP8O95379 198 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
VRK3-213ENST00000597215 SERPINA3P01011 423 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 SLC25A16P16260 332 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 GIFP27352 417 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 MAP2K4P45985 399 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 CHN2P52757 468 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 TMEM33P57088 247 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 DOC2BQ14184 412 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 CEP78Q5JTW2 689 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 PRAMEF6Q5VXH4 476 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 SPNS3Q6ZMD2 512 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ZNF367Q7RTV3 350 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 OR5A2Q8NGI9 324 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 HPSE2Q8WWQ2 592 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 RGP1Q92546 391 aaPredicted RBP12.14□□□□□ -0.47
VRK3-213ENST00000597215 CCL17Q92583 94 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 FGGYQ96C11 551 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ADAT3Q96EY9 351 aaPredicted RBP12.14□□□□□ -0.47
VRK3-213ENST00000597215 RNF170Q96K19 258 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 TECTBQ96PL2 329 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ISYNA1Q9NPH2 558 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 GPR173Q9NS66 373 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 CACNG2Q9Y698 323 aa12.14□□□□□ -0.47
VRK3-213ENST00000597215 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 A6NLC8 198 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 CD2P06729 351 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 GRPP07492 148 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 HSMCR30P0CW71 290 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
VRK3-213ENST00000597215 GPM6AP51674 278 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 GNG3P63215 75 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 MLLT11Q13015 90 aaPredicted RBP12.13□□□□□ -0.47
VRK3-213ENST00000597215 RIN1Q13671 783 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 ZNF181Q2M3W8 571 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 KCTD8Q6ZWB6 473 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 UTS2BQ765I0 119 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 SPARTQ8N0X7 666 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 OR1M1Q8NGA1 313 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
VRK3-213ENST00000597215 UFD1Q92890 307 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms