RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SELLP14151 372 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 ESRRGP62508 458 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 IL5RAQ01344 420 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 ROM1Q03395 351 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 BAMBIQ13145 260 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 LCN1P1Q5VSP4 162 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 AADACL4Q5VUY2 407 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 STUMQ69YW2 141 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 AMIGO2Q86SJ2 522 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 GALNT4Q8N4A0 578 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 FTMTQ8N4E7 242 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 LRTOMTQ8WZ04 291 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 TAF15Q92804 592 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIG1-212ENST00000596549 RPL3LQ92901 407 aaKnown RBP10.8□□□□□ -0.68
LIG1-212ENST00000596549 CNN2Q99439 309 aaKnown RBP10.8□□□□□ -0.68
LIG1-212ENST00000596549 PCGF1Q9BSM1 259 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 RTL8AQ9BWD3 113 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 WDR13Q9H1Z4 485 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 ADGRL4Q9HBW9 690 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 MPC1Q9Y5U8 109 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 A0A0U1RQV5 110 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 G3V2T6 193 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 MAGEB4O15481 346 aaPredicted RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 TTRP02766 147 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 TFF1P04155 84 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 RNASE1P07998 156 aaKnown RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 HKR1P10072 659 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 MUC1P15941 1255 aaPredicted RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 SLC9A3R2Q15599 337 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 SNCBQ16143 134 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 DEFB112Q30KQ8 113 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 FAM76BQ5HYJ3 339 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 DMRTC1Q5HYR2 192 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 C1orf146Q5VVC0 180 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 NXNL2Q5VZ03 156 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 KCTD18Q6PI47 426 aaPredicted RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 DEGS2Q6QHC5 323 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 RBMS3Q6XE24 437 aaKnown RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 PLEKHG7Q6ZR37 379 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 KRT74Q7RTS7 529 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 ZDHHC23Q8IYP9 409 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 ZNF679Q8IYX0 411 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 TCEANCQ8N8B7 351 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 SCCPDHQ8NBX0 429 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 TMEM163Q8TC26 289 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 ST8SIA4Q92187 359 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 PIGCQ92535 297 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 PPP1R14AQ96A00 147 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 CCL13Q99616 98 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 CIB1Q99828 191 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 MICU1Q9BPX6 476 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 TEX12Q9BXU0 123 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
LIG1-212ENST00000596549 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 AP4S1Q9Y587 144 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
LIG1-212ENST00000596549 ZNF816-ZNF321PA0A0X1KG74 233 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 TMEM269A0A1B0GVZ9 245 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 CLDN34H7C241 214 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 RHBDL1O75783 438 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 FASP25445 335 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 POLR2IP36954 125 aaKnown RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 GMFBP60983 142 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 CXCR4P61073 352 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 MICBQ29980 383 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 CEP78Q5JTW2 689 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 GPR157Q5UAW9 335 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 MEPCEQ7L2J0 689 aaKnown RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 SSX6Q7RTT6 188 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 SLC35F2Q8IXU6 374 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 OR10Z1Q8NGY1 313 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 C12orf43Q96C57 262 aaKnown RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 FAM71F1Q96KD3 344 aaPredicted RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 WDFY2Q96P53 400 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 MROQ9BYG7 248 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 PRRG3Q9BZD7 231 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 PBOV1Q9GZY1 135 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 PRDM13Q9H4Q3 707 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 ABCB9Q9NP78 766 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 GPR84Q9NQS5 396 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 SNTG1Q9NSN8 517 aa10.78□□□□□ -0.68
LIG1-212ENST00000596549 NUFIP1Q9UHK0 495 aaKnown RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 RPUSD1Q9UJJ7 312 aaKnown RBP10.78□□□□□ -0.68
LIG1-212ENST00000596549 CENPVL3A0A0U1RRI6 287 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 SLC22A31A6NKX4 558 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 P2RY10O00398 339 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.69
LIG1-212ENST00000596549 AKR7A2O43488 359 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 ZNF254O75437 659 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 TOX4O94842 621 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 FAHP16930 419 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 MTNR1AP48039 350 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 RASSF2P50749 326 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 GPM6AP51674 278 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 RIDAP52758 137 aaKnown RBP10.77□□□□□ -0.69
LIG1-212ENST00000596549 ZNF829Q3KNS6 432 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms