RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 OR56B2PQ8NGI1 322 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 SSC4DQ8WTU2 575 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 ABHD1Q96SE0 405 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 OPA3Q9H6K4 179 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 NPAP1Q9NZP6 1156 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 TBC1D24Q9ULP9 559 aa13.08□□□□□ -0.32
VRK3-207ENST00000594092 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
VRK3-207ENST00000594092 IGHV2OR16-5A0A0B4J2B6 119 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ALDOBP05062 364 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 CHRNB4P30926 498 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 MMP15P51511 669 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ZNF83P51522 516 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 UCP2P55851 309 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 PPP1CBP62140 327 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 C3orf36Q3SXR2 165 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 TMEM69Q5SWH9 247 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 CLVS2Q5SYC1 327 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 RNF144BQ7Z419 303 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 RFT1Q96AA3 541 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 SPACA5Q96QH8 159 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 USB1Q9BQ65 265 aaKnown RBP13.07□□□□□ -0.32
VRK3-207ENST00000594092 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 GPR173Q9NS66 373 aa13.07□□□□□ -0.32
VRK3-207ENST00000594092 ZNF816-ZNF321PA0A0X1KG74 233 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 GMDSO60547 372 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 PRF1P14222 555 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CALCRP30988 508 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 ASAH1Q13510 395 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 IZUMO1Q8IYV9 350 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 OR4D6Q8NGJ1 314 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 UBASH3BQ8TF42 649 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 NPRL2Q8WTW4 380 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 C15orf40Q8WUR7 153 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 PHF21AQ96BD5 680 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CCDC120Q96HB5 630 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 THAP7Q9BT49 309 aaPredicted RBP13.06□□□□□ -0.32
VRK3-207ENST00000594092 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 GGT3PA6NGU5 568 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 M0R1B8 84 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CTDSPLO15194 276 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 NRASP01111 189 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CDK2P24941 298 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 ASCL1P50553 236 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 NAAAQ02083 359 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 OR1J1Q8NGS3 322 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 KCNK15Q9H427 330 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 COQ3Q9NZJ6 369 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
VRK3-207ENST00000594092 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 TPPPO94811 219 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 BPNT1O95861 308 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 MNDAP41218 407 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 EFNB2P52799 333 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 AWAT2Q6E213 333 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 KRT74Q7RTS7 529 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
VRK3-207ENST00000594092 CSNK2A3Q8NEV1 391 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 SLC25A40Q8TBP6 338 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 PIGCQ92535 297 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 PIGTQ969N2 578 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 PTX4Q96A99 478 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 GPER1Q99527 375 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 DIABLOQ9NR28 239 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 KCNN3Q9UGI6 736 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 ESPL1Q14674 2120 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 RELNP78509 3460 aa13.05□□□□□ -0.32
VRK3-207ENST00000594092 XRCC3O43542 346 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 GSTZ1O43708 216 aaPredicted RBP13.04□□□□□ -0.32
VRK3-207ENST00000594092 CTAG2O75638 210 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 RAD52P43351 418 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 CNN3Q15417 329 aaKnown RBP13.04□□□□□ -0.32
VRK3-207ENST00000594092 KISS1Q15726 138 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 ZNF57Q68EA5 555 aaPredicted RBP13.04□□□□□ -0.32
VRK3-207ENST00000594092 GALNT11Q8NCW6 608 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 SPSB1Q96BD6 273 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 ATG5Q9H1Y0 275 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 FAIMQ9NVQ4 179 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 A0A1B0GUH1 482 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 FAM90A27PA6NNH2 459 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 LDLRAD4O15165 306 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 CST4P01036 141 aa13.04□□□□□ -0.32
VRK3-207ENST00000594092 RAB6AP20340 208 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms