RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MRPL21Q7Z2W9 205 aaKnown RBP11.59□□□□□ -0.55
VMP1-217ENST00000593168 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 OR13C9Q8NGT0 318 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 LILRB4Q8NHJ6 448 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 ZFAND2BQ8WV99 257 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 CEP19Q96LK0 163 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 WDR12Q9GZL7 423 aaKnown RBP11.59□□□□□ -0.55
VMP1-217ENST00000593168 MIXL1Q9H2W2 232 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 ADAM30Q9UKF2 790 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 HCFC1P51610 2035 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 BMP4P12644 408 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 ZNF45Q02386 682 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 ZNF846Q147U1 533 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 HES5Q5TA89 166 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 FBXW12Q6X9E4 464 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 MEX3BQ6ZN04 569 aaKnown RBP11.58□□□□□ -0.56
VMP1-217ENST00000593168 OR5AS1Q8N127 324 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 MFSD4AQ8N468 514 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 CSNK2A3Q8NEV1 391 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 OR52N4Q8NGI2 321 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 OR6M1Q8NGM8 313 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 ZNF671Q8TAW3 534 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 TRMT10AQ8TBZ6 339 aaKnown RBP11.58□□□□□ -0.56
VMP1-217ENST00000593168 PIGTQ969N2 578 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 TECTBQ96PL2 329 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 UQCC2Q9BRT2 126 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 BCL2L14Q9BZR8 327 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 PLGRKTQ9HBL7 147 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 NEK6Q9HC98 313 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 STEAP1Q9UHE8 339 aa11.58□□□□□ -0.56
VMP1-217ENST00000593168 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 IGHV2OR16-5A0A0B4J2B6 119 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 IGKV1-9A0A0C4DH69 117 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 ZNF816-ZNF321PA0A0X1KG74 233 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 GGT3PA6NGU5 568 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 MAGEB3O15480 346 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 PAHP00439 452 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 CST4P01036 141 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
VMP1-217ENST00000593168 HTR2CP28335 458 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 ZNF83P51522 516 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 CAPZA1P52907 286 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 PPP1CBP62140 327 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 NAAAQ02083 359 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
VMP1-217ENST00000593168 UBE2V2Q15819 145 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 RAB11BQ15907 218 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 CLVS2Q5SYC1 327 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 SEZ6L2Q6UXD5 910 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 LAX1Q8IWV1 398 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 FTMTQ8N4E7 242 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 OR56B2PQ8NGI1 322 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 OR5H6Q8NGV6 325 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
VMP1-217ENST00000593168 SLC25A28Q96A46 364 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 SPSB1Q96BD6 273 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 LRRC46Q96FV0 321 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 SORCS2Q96PQ0 1159 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 POFUT1Q9H488 388 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 METTL17Q9H7H0 456 aaPredicted RBP11.57□□□□□ -0.56
VMP1-217ENST00000593168 LIN7BQ9HAP6 207 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 NPAP1Q9NZP6 1156 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 KCNN3Q9UGI6 736 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 RHBDD3Q9Y3P4 386 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 ETV7Q9Y603 341 aa11.57□□□□□ -0.56
VMP1-217ENST00000593168 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.56
VMP1-217ENST00000593168 CD300LBA8K4G0 201 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 M0R1B8 84 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 GMDSO60547 372 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 HPGDSO60760 199 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 NRASP01111 189 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 APOA1P02647 267 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 FAM157BP0CG42 384 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 SNRPBP14678 240 aaKnown RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 RAC2P15153 192 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 PRKACBP22694 351 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 AZGP1P25311 298 aaKnown RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 ZNF93P35789 620 aaPredicted RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 PEX19P40855 299 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 EVX1P49640 407 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 RIN1Q13671 783 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 CNN3Q15417 329 aaKnown RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 METAP1DQ6UB28 335 aaPredicted RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 C22orf34Q6ZV56 151 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 JAGN1Q8N5M9 183 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 SAMD12Q8N8I0 201 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 OR1J1Q8NGS3 322 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 SLC25A40Q8TBP6 338 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 LGALS14Q8TCE9 139 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 DIRAS2Q96HU8 199 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 CGGBP1Q9UFW8 167 aaPredicted RBP11.56□□□□□ -0.56
VMP1-217ENST00000593168 OR5V1Q9UGF6 321 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 SPEF1Q9Y4P9 236 aa11.56□□□□□ -0.56
VMP1-217ENST00000593168 A0A0B4J203 849 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms