RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 NEIL1Q96FI4 390 aaPredicted RBP13.12□□□□□ -0.31
LIG3-215ENST00000592690 MICU1Q9BPX6 476 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 SSBP3Q9BWW4 388 aaPredicted RBP13.12□□□□□ -0.31
LIG3-215ENST00000592690 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 POLR3KQ9Y2Y1 108 aaPredicted RBP13.12□□□□□ -0.31
LIG3-215ENST00000592690 SNX5Q9Y5X3 404 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 ATRQ13535 2644 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 IGHV3OR15-7A0A075B7D8 119 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 METTL15A6NJ78 407 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 J3QLI3 93 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 J3QRE1 110 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 P2RY10O00398 339 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 DLGAP1O14490 977 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 CDIPTO14735 213 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 DHRS3O75911 302 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 LHBP01229 141 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 PSMB10P40306 273 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 GNB2P62879 340 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 RCN1Q15293 331 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 KRT74Q7RTS7 529 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 CATSPERDQ86XM0 798 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 SEMA6DQ8NFY4 1073 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 OR8B3Q8NGG8 313 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 RORBQ92753 470 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 RPL3LQ92901 407 aaKnown RBP13.11□□□□□ -0.31
LIG3-215ENST00000592690 RNF170Q96K19 258 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 OR8B2Q96RD0 313 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 TLNRD1Q9H1K6 362 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 C7orf69Q9H7B7 122 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 ABCB9Q9NP78 766 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
LIG3-215ENST00000592690 CTSZQ9UBR2 303 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 OPN4Q9UHM6 478 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 PIGLQ9Y2B2 252 aa13.11□□□□□ -0.31
LIG3-215ENST00000592690 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.1□□□□□ -0.31
LIG3-215ENST00000592690 SULT1C4O75897 302 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ATP6V1B1P15313 513 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ZNF12P17014 697 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 GATA3P23771 443 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 PEX2P28328 305 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 PITPNBP48739 271 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ISL1P61371 349 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 SRSF2Q01130 221 aaKnown RBP13.1□□□□□ -0.31
LIG3-215ENST00000592690 PAX2Q02962 417 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 RIPPLY1Q0D2K3 151 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 LRRC36Q1X8D7 754 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 LPCAT4Q643R3 524 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 NLRC3Q7RTR2 1065 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 FAM90A1Q86YD7 464 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 RNPEPL1Q9HAU8 725 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 ACOXLQ9NUZ1 547 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 OR5V1Q9UGF6 321 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 INSIG2Q9Y5U4 225 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 V9GYS6 101 aa13.1□□□□□ -0.31
LIG3-215ENST00000592690 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 TMEM210A6NLX4 147 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 H3BSH0 61 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
LIG3-215ENST00000592690 SLC16A6O15403 523 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
LIG3-215ENST00000592690 GYPAP02724 150 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 DBTP11182 482 aaKnown RBP13.09□□□□□ -0.31
LIG3-215ENST00000592690 CPT2P23786 658 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 GPM6AP51674 278 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 ACTC1P68032 377 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 ACTA1P68133 377 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 ELF3P78545 371 aaPredicted RBP13.09□□□□□ -0.31
LIG3-215ENST00000592690 WDR38Q5JTN6 314 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 MOB3CQ70IA8 216 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 OR14K1Q8NGZ2 314 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 RHOXF1Q8NHV9 184 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 APH1BQ8WW43 257 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
LIG3-215ENST00000592690 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 SEH1LQ96EE3 360 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 AMBNQ9NP70 447 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 CLN8Q9UBY8 286 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 ENPP5Q9UJA9 477 aa13.09□□□□□ -0.31
LIG3-215ENST00000592690 EXOGQ9Y2C4 368 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms